DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4465 and Slc22a30

DIOPT Version :9

Sequence 1:NP_650847.1 Gene:CG4465 / 42374 FlyBaseID:FBgn0038750 Length:577 Species:Drosophila melanogaster
Sequence 2:NP_795976.1 Gene:Slc22a30 / 319800 MGIID:2442750 Length:552 Species:Mus musculus


Alignment Length:585 Identity:119/585 - (20%)
Similarity:219/585 - (37%) Gaps:161/585 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 MGNFGPWQLRSL-LILFLC-----KIPAAWFMACILFTAPDLYPEEEYKCDTTAFGPDVNSTVSL 124
            :|:.|.:|:..: .:|||.     .|....|.|.|          ..::|    :.|.:::..:.
Mouse    10 VGSLGRFQILQISFVLFLVGLVVPHITMENFTAAI----------PNHRC----WAPILDNDTAS 60

  Fly   125 DHCYVMVNYG---------ESAYAMRQCRKF-------LYTTGFHS------------------- 154
            |:...:::..         :|...:.:||:|       |:..|..|                   
Mouse    61 DNGSRILSQDDLLRISIPLDSNLRLDKCRRFAQPQWHLLHLNGTFSNETEPDTEPCVDGWVYDRS 125

  Fly   155 -----LTMEFDLVCLCDFFVAWSQYWHLFGLLIGGVAATKLMRVLSPRQIYRTGIWCLLMCSLL- 213
                 :..|:||||......:.:::..:.||.||.:....|..        |.|...:|.|:|| 
Mouse   126 NFLSTIVTEWDLVCESQALNSVAKFSFMIGLFIGAIICGHLSD--------RFGRKFILTCALLQ 182

  Fly   214 -------MGLVKDFSLHCGLRCLAAVSCCFMITSGQYIFGDITAGKYRVGTLILYDCFWALGLIL 271
                   :.....|.::|.||.||.:|...:..:...:..:.|:.|:.....:|..|..::|.::
Mouse   183 FAITETCVAFAPSFFIYCLLRFLAGMSVEPISVNSHLLMLEWTSPKFLGMVAVLTSCAASIGYMI 247

  Fly   272 LPGLASNAPSWQHIYLGVTLSLLVIVFLLPWTPDSPRWQLQHTKEAQLAIERTVGILLEAARTNG 336
            |.|||.....|:|:.|.:::.:...:.|..|..:|.|| |..|.:.|..::.    |.:.|..||
Mouse   248 LAGLAFLFRIWRHLQLAMSVPIFFFLILTRWMSESARW-LIVTNKPQKGLKE----LRKVAHMNG 307

  Fly   337 --------RMHKVSKELPQQLEELRERMLEPMPAVHWMHLWMGQRRSTFH--LVAVHMALATFM- 390
                    .|..|...:..:||..:.:               ...|..||  ::...:.:.:|| 
Mouse   308 MKNSGNTLTMEVVEASMKNELEAAKRK---------------SSPRDLFHTPILRKRICVLSFMR 357

  Fly   391 ----VVNTGLLLHVRSFGREHLVSNTL-------AMG-LAEMLGCFLALHLTFNLSERKWQWAGG 443
                :...||.||:     :||.:|.:       |:| |..::|.|:..|:...:::.......|
Mouse   358 YLFTISIFGLSLHL-----QHLSTNIILLQFLSSALGILISVIGHFVLNHMGRRITQLVLMSLRG 417

  Fly   444 FAIVVGCIGSICWFLAEEDMPEVYGLTLGLLMASLPQAAVACAQSMILAC-----LGELVPMEQR 503
            ..::...      |:.:|..      ||.::||:|     |.|.|.:..|     :.||:|...|
Mouse   418 IFMLTAV------FVPQEMQ------TLRIIMATL-----AAALSSLCMCVSNLHINELLPTTLR 465

  Fly   504 -------SCLSFSAVTWARVWQLSASFLTLLRQVSPALSLSAFCLLVILGGLGTCCLVTRDKEQP 561
                   :....|.:..|.::.|.|::...|    |.:....|.   ||.|. :..|:...|.||
Mouse   466 ATGMGVIAMFGNSGLFLAPLFMLLATYSANL----PWIFYGGFS---ILYGF-SVFLLPETKNQP 522

  Fly   562  561
            Mouse   523  522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4465NP_650847.1 2A0119 67..553 CDD:273328 115/574 (20%)
MFS 169..>303 CDD:119392 31/141 (22%)
Slc22a30NP_795976.1 2A0119 11..525 CDD:273328 119/584 (20%)
MFS 151..516 CDD:119392 91/422 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167843636
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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