DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4465 and LOC303140

DIOPT Version :9

Sequence 1:NP_650847.1 Gene:CG4465 / 42374 FlyBaseID:FBgn0038750 Length:577 Species:Drosophila melanogaster
Sequence 2:XP_008765965.1 Gene:LOC303140 / 303140 RGDID:1561735 Length:555 Species:Rattus norvegicus


Alignment Length:530 Identity:108/530 - (20%)
Similarity:194/530 - (36%) Gaps:152/530 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 DDDVITHIMGNFGPWQLRSLLILFLCKIPAAWF-MACILFTAPDLYPEEEYKCDTTAFGPDVNST 121
            |.|.:|..:|.:||:|.....:|....||..:. ::.:..||     ..|::|    ..||   |
  Rat     3 DYDELTAFLGEWGPFQRLIFFLLSASIIPNGFTGLSAVFLTA-----SPEHRC----LVPD---T 55

  Fly   122 VSLDHCY----VMVNYGESAYAMRQCRKFLYTT--GFHSLTM----------------------- 157
            |:|...:    :.:...:......:||::...|  .|.:|.:                       
  Rat    56 VNLSSAWRNHSIPLEMKDGRQVPHKCRRYRLATIANFSALGLEPGEDVDLKQLELENCLDGWEYS 120

  Fly   158 ----------EFDLVCLCDFFVAW------SQYWHLFGLLIGGVAATKLMRVLSPRQIYRTGIWC 206
                      |::|||    ..||      |.::  .|:|:|...:.:|......:.:.   .|.
  Rat   121 KEVFLSTIVTEWNLVC----NDAWKAPLTTSMFY--VGVLLGSFISGQLSDRFGRKPVL---FWT 176

  Fly   207 LLMCSLLMGLVKDFSLHCGLRCLAAVSCCF--------MITSGQ-------YIFG-DITAGKYRV 255
            :             .:|.|...|...|..|        ::..|.       ::.| :|.:...|:
  Rat   177 M-------------GMHTGFSFLQVFSVNFEMFTLLFALVGMGHISNYVAAFVLGTEILSKSIRI 228

  Fly   256 GTLILYDC-FWALGLILLPGLASNAPSWQHIYLGVTLSLLVIVFLLPWTPDSPRWQLQ--HTKEA 317
            ....|..| |:|.|.::||..|.....|:.:.:.:||..::...|..:.|:||||.:.  ..|||
  Rat   229 IFATLGICIFFAFGFMVLPLFAYFIRDWRMLLMAITLPGVLCGALWWFIPESPRWLISQGRVKEA 293

  Fly   318 QLAIERTVGILLEAARTNGRMHKVSKELPQQLEELRERMLEPMPAVHWMHLWMGQRRST-----F 377
            ::       |:.:||:.||.:...:...|.:...|::                |..::|     :
  Rat   294 EV-------IIRKAAKFNGIVAPSTIFDPSETTNLQD----------------GNAKNTQSHHIY 335

  Fly   378 HLVAV-HMALATFMVVNTGLLLHVRSFG----REHLVSNTLAMGL--------AEMLGCFLALHL 429
            .||.. ::.:.|.|.:...|.:.|..||    ..:|..|....|.        |.:|...|..|:
  Rat   336 DLVRTRNIRILTIMSIILWLTISVGYFGLSLDTPNLNGNIYVNGFLLAAVEVPAYVLAWLLLQHV 400

  Fly   430 TFNLSERKWQWAGGFAIVVGCIGSICWFLAEEDMPEVYGLTLGLLMASLPQAAVACAQSMILACL 494
            |     |::..||  ::.:|  ||:...|.......:| |:..|:|..  :..:..|.||:....
  Rat   401 T-----RRYSMAG--SLFLG--GSVLLILQLVPSDLLY-LSTALVMVG--KFGITSAYSMVYVYT 453

  Fly   495 GELVPMEQRS 504
            .||.|...|:
  Rat   454 AELYPTVVRN 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4465NP_650847.1 2A0119 67..553 CDD:273328 105/521 (20%)
MFS 169..>303 CDD:119392 29/156 (19%)
LOC303140XP_008765965.1 2A0119 12..523 CDD:273328 105/521 (20%)
MFS 123..513 CDD:119392 84/398 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704438at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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