DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4465 and Slc22a1

DIOPT Version :9

Sequence 1:NP_650847.1 Gene:CG4465 / 42374 FlyBaseID:FBgn0038750 Length:577 Species:Drosophila melanogaster
Sequence 2:NP_036829.1 Gene:Slc22a1 / 24904 RGDID:3224 Length:556 Species:Rattus norvegicus


Alignment Length:553 Identity:128/553 - (23%)
Similarity:212/553 - (38%) Gaps:125/553 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 DDVITHIMGNFGPWQLRSLLILFL----------------------CKIP--------AAWFMAC 93
            |||:..: |.||.:|.::.|:|.|                      |:.|        ..|..|.
  Rat     5 DDVLEQV-GEFGWFQKQAFLLLCLISASLAPIYVGIVFLGFTPGHYCQNPGVAELSQRCGWSQAE 68

  Fly    94 IL-FTAPDLYPEEEYKCDTTAFGPDVNSTVSLDHCY-----VMVNYGESAYAMRQCRK-FLYTTG 151
            .| :|.|.|.|.:|....:.....:|:...|...|.     ::.|  .|...:..|.. ::|.|.
  Rat    69 ELNYTVPGLGPSDEASFLSQCMRYEVDWNQSTLDCVDPLSSLVAN--RSQLPLGPCEHGWVYDTP 131

  Fly   152 FHSLTMEFDLVC----LCDFFVAWSQYWHLFGLLIGGVAATKLMRVLSPRQIYRTGIWCLLMCSL 212
            ..|:..||:|||    ..|.|.:........|.|:.|..|.:..|.|           |||:.:|
  Rat   132 GSSIVTEFNLVCGDAWKVDLFQSCVNLGFFLGSLVVGYIADRFGRKL-----------CLLVTTL 185

  Fly   213 -------LMGLVKDFSLHCGLRCLAAVSCCFMITSGQYIFG-----DITAGKYRVGTLILYDCFW 265
                   |..:..|::.....|.|..     |::.|.::.|     :.....||..|.|||...:
  Rat   186 VTSVSGVLTAVAPDYTSMLLFRLLQG-----MVSKGSWVSGYTLITEFVGSGYRRTTAILYQMAF 245

  Fly   266 ALGLILLPGLASNAPSWQHIYLGVTLSLLVIVFLLPWTPDSPRWQLQHTKEAQLAIERTVGILLE 330
            .:||:.|.|:|...|.|:.:.|.|:|...:.:....:.|:||||.|     :|....|.|.|:.:
  Rat   246 TVGLVGLAGVAYAIPDWRWLQLAVSLPTFLFLLYYWFVPESPRWLL-----SQKRTTRAVRIMEQ 305

  Fly   331 AARTNGRMHKVSKELPQQLEELRERMLEPMPAVHWMHLWMGQRRSTFHLVAVHMALATFMVVNTG 395
            .|:.||::.....::....|:..|:.   .|:...:......|:.|..|:.:..:.|   |:..|
  Rat   306 IAQKNGKVPPADLKMLCLEEDASEKR---SPSFADLFRTPNLRKHTVILMYLWFSCA---VLYQG 364

  Fly   396 LLLHVRSFGREHLVSNTLAMGLAEMLGCFLALHLTFNLSERKWQWAGGFAIVVGCIGSICWFLAE 460
            |::||.:.| .:|..:.....|.|....|:.| :|.:...|.:..|....:.    |:.|     
  Rat   365 LIMHVGATG-ANLYLDFFYSSLVEFPAAFIIL-VTIDRIGRIYPIAASNLVT----GAAC----- 418

  Fly   461 EDMPEVYGLTLGLLMASLPQAAVACAQSMILACLGEL--VPMEQRSCLSFSAVTWARVWQLSASF 523
                        |||..:|......  ::.|||||.:  ..:.|..||..:.:           :
  Rat   419 ------------LLMIFIPHELHWL--NVTLACLGRMGATIVLQMVCLVNAEL-----------Y 458

  Fly   524 LTLLRQVSPALSLSAFCLLVILGGLGTCCLVTR 556
            .|.:|.:. .:..||.|   .|||:.|..:|.|
  Rat   459 PTFIRNLG-MMVCSALC---DLGGIFTPFMVFR 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4465NP_650847.1 2A0119 67..553 CDD:273328 123/540 (23%)
MFS 169..>303 CDD:119392 33/145 (23%)
Slc22a1NP_036829.1 2A0119 12..525 CDD:273328 125/545 (23%)
MFS 125..515 CDD:119392 102/430 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166347085
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704438at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.850

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