DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4465 and Slc22a29

DIOPT Version :9

Sequence 1:NP_650847.1 Gene:CG4465 / 42374 FlyBaseID:FBgn0038750 Length:577 Species:Drosophila melanogaster
Sequence 2:NP_766364.1 Gene:Slc22a29 / 236293 MGIID:3605624 Length:551 Species:Mus musculus


Alignment Length:580 Identity:121/580 - (20%)
Similarity:212/580 - (36%) Gaps:152/580 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 MGNFGPWQLRSLLILFLCKIPAAWFMACILFTA--PDLYPEEEYKC-----DTTAFGPDVNSTVS 123
            :|:.|.:|:..::.|||........:....|||  |:      ::|     |......:.:..:|
Mouse    10 VGSLGRFQILQIVFLFLLNAIVVPHIGMENFTAAIPN------HRCWVPILDNDTASDNGSRILS 68

  Fly   124 LDHCYVMVNYGESAYAMRQCRKF-------LYTTGFHS------------------------LTM 157
            .|....:....:|...:.:||:|       |:..|..|                        :..
Mouse    69 QDDLLRISIPLDSNLRLDKCRRFAQPQWHLLHLNGTFSNVSEPDTEPCVDGWVYDRSNFLSTIVT 133

  Fly   158 EFDLVCLCDFFVAWSQYWHLFGLLIGGVAATKLMRVLSPRQIYRTGIWCLLMCSLL--------M 214
            |:||||......:.:::..:.||.|||:....|..        |.|...:|.|:||        :
Mouse   134 EWDLVCESQALNSVTKFSFMIGLFIGGIICGHLSD--------RFGRKFILTCALLQFAITETCV 190

  Fly   215 GLVKDFSLHCGLRCLAAVSCCFMITSGQYIFGDITAGKYRVGTLILYDCFWALGLILLPGLASNA 279
            .....|.::|.||.||.:|...:..:...:..:.|:.|:.....:|..|...:|.::|.|||...
Mouse   191 AFAPSFFIYCSLRFLAGMSVEPISVNSHLLMLEWTSPKFLAMMAVLSSCAPNIGFMILAGLAFLF 255

  Fly   280 PSWQHIYLGVTLSLLVIVFLLPWTPDSPRWQLQHTKEAQLAIERTVGILLEAARTNG-------R 337
            ..|.|:.|.::..:...:.|..|..:|.||.:...|.     ::.:..|.:.|..||       .
Mouse   256 RIWHHLQLTMSAPIFFFLILTRWLSESARWLILINKP-----QKGLKELRKVAHMNGMKNSGDLT 315

  Fly   338 MHKVSKELPQQLEELRERMLEPMPAVHWMHLWMGQRRSTFHL------VAVHMALATFMVVN-TG 395
            |..|...:..:||..:.:     |::          |..||.      :.|...:..|..|: .|
Mouse   316 MEIVRTSMKAELEAAKTK-----PSL----------RDLFHTSILRKRICVLSFIRLFFTVSIIG 365

  Fly   396 LLLHVRSFGREHLVSNTLAMG--------LAEMLGCFLALHLTFNLSERKWQWAGGFAIVVGCIG 452
            |.:|:     :||.||.:.:.        |..::|.|:..|:...::........|..|::..  
Mouse   366 LAVHL-----QHLSSNIILLQFLISALAILVSVIGPFVLNHIGRRITYLVLMSLRGIFIMIAV-- 423

  Fly   453 SICWFLAEEDMPEVYGLTLGLLMASLPQAAVACAQSMILACLG-------ELVPMEQRSCLSFSA 510
                |:.:|..      ||.::||:|       |..:...|:|       ||:|...|:    :|
Mouse   424 ----FVPQEMQ------TLRIIMATL-------AGGISSLCVGVSHLHTNELLPTTLRA----TA 467

  Fly   511 VTWARVWQLSASFLTLLRQVSPALSLSA--FCLL--VILGGLG-----TCCLVTRDKEQP 561
            :.....:..|..||      ||...|.|  :..|  :..||..     |..|:...|.||
Mouse   468 LGVIGFFGNSGLFL------SPLFMLVATYYANLPWIFYGGFSIFNAFTVFLLPETKNQP 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4465NP_650847.1 2A0119 67..553 CDD:273328 117/569 (21%)
MFS 169..>303 CDD:119392 32/141 (23%)
Slc22a29NP_766364.1 MFS_OAT 109..515 CDD:340932 97/467 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167843635
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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