DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4465 and Slc22a12

DIOPT Version :9

Sequence 1:NP_650847.1 Gene:CG4465 / 42374 FlyBaseID:FBgn0038750 Length:577 Species:Drosophila melanogaster
Sequence 2:NP_033229.3 Gene:Slc22a12 / 20521 MGIID:1195269 Length:553 Species:Mus musculus


Alignment Length:535 Identity:109/535 - (20%)
Similarity:186/535 - (34%) Gaps:146/535 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 MGNFGPWQLRSLLILFLCKIPAAW---------FMACILFTAPDLYPEEEYKC------DTTA-- 113
            :|..|.:||...:.|.   .|..|         |.|.:          ..::|      ::|:  
Mouse    10 VGGLGRFQLFQTVALV---TPILWVTTQNMLENFSAAV----------PHHRCWVPLLDNSTSQA 61

  Fly   114 -----FGPDVNSTVSL--------DHCY--------------VMVNYGESAYAMRQCRK---FLY 148
                 .||||...||:        ..|.              ...|:.::  |...|..   :.:
Mouse    62 SIPGDLGPDVLLAVSIPPGPDQQPHQCLRFRQPQWQLTESNATATNWSDA--ATEPCEDGWVYDH 124

  Fly   149 TTGFHSLTMEFDLVCLCDFFVAWSQYWHLFGLLIG----GVAATKL--MRVLSPRQIYRTGIWCL 207
            :|...::...:||||........:|...|.|:|:|    |.|:.:.  .|||:         |..
Mouse   125 STFRSTIVTTWDLVCNSQALRPMAQSIFLAGILVGAAVCGHASDRFGRRRVLT---------WSY 180

  Fly   208 LMCSL---LMGLVKDFSLHCGLRCLAAVSCCFMITSGQYIFGDITAGKYRVGTLILYDCFWALGL 269
            |:.|:   ....:..|.|:|..|.|.|.:...::.:...:..:.|:.:.....:.|....::.|.
Mouse   181 LLVSVSGTAAAFMPTFPLYCLFRFLLASAVAGVMMNTASLLMEWTSAQGSPLVMTLNALGFSFGQ 245

  Fly   270 ILLPGLASNAPSWQHIYLGVTLSLLVIVFLLPWTPDSPRWQL------QHTKEAQ--LAIER--- 323
            :|...:|....||:.:.|.|:....:......|.|:|.||.:      |..:|.|  .|:.|   
Mouse   246 VLTGSVAYGVRSWRMLQLAVSAPFFLFFVYSWWLPESARWLITVGKLDQGLQELQRVAAVNRRKA 310

  Fly   324 -----TVGILLEAARTNGRMHKVSKELPQQLEE--LRERMLEPMPAVHWMHLWMGQRRSTFHLVA 381
                 |:.:|..|........|....|...|..  ||.|.:..|  :.|.....     ||:.:|
Mouse   311 EGDTLTMEVLRSAMEEEPSRDKAGASLGTLLHTPGLRHRTIISM--LCWFAFGF-----TFYGLA 368

  Fly   382 VHM-ALAT--FMV----------VNTGLLLHVRSFGREHL-VSNTLAMGLAEMLGCFLALHLTFN 432
            :.: ||.:  |::          |.||.||.:...||... ||..:..||. :|...|..|    
Mouse   369 LDLQALGSNIFLLQALIGIVDFPVKTGSLLLISRLGRRLCQVSFLVLPGLC-ILSNILVPH---- 428

  Fly   433 LSERKWQWAGGFAIV--------VGCIG---SICWFLAEEDMPEVYGLT-LGLLMASLPQAAVAC 485
                      |..::        :||:|   :.....:.|..|.|..:| :||...:....|:..
Mouse   429 ----------GMGVLRSALAVLGLGCLGGAFTCITIFSSELFPTVIRMTAVGLCQVAARGGAMLG 483

  Fly   486 AQSMILACLGELVPM 500
            ....:|...|..:|:
Mouse   484 PLVRLLGVYGSWMPL 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4465NP_650847.1 2A0119 67..553 CDD:273328 109/534 (20%)
MFS 169..>303 CDD:119392 28/142 (20%)
Slc22a12NP_033229.3 2A0119 11..526 CDD:273328 109/534 (20%)
MFS 147..516 CDD:119392 83/383 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167843311
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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