DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4465 and Slc22a1

DIOPT Version :9

Sequence 1:NP_650847.1 Gene:CG4465 / 42374 FlyBaseID:FBgn0038750 Length:577 Species:Drosophila melanogaster
Sequence 2:NP_033228.2 Gene:Slc22a1 / 20517 MGIID:108111 Length:556 Species:Mus musculus


Alignment Length:560 Identity:128/560 - (22%)
Similarity:214/560 - (38%) Gaps:139/560 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 DDVITHIMGNFGPWQLRSLLILFLCKIPAAWFMACILFT--APDLY------PEEEYKCDTTAFG 115
            |||:.|: |.||.:|.::.|:|.|.....|.....|:|.  .||.:      .|...:|   .:.
Mouse     5 DDVLEHV-GEFGWFQKQAFLLLCLISASLAPIYVGIVFLGFTPDHHCRSPGVAELSQRC---GWS 65

  Fly   116 P--DVNSTVSLDHCYVMVNYGESAYAMRQCRKF-------------------------------- 146
            |  ::|.||.     .:.:.||::: :.||.|:                                
Mouse    66 PAEELNYTVP-----GLGSAGEASF-LSQCMKYEVDWNQSTLDCVDPLSSLAANRSHLPLSPCEH 124

  Fly   147 --LYTTGFHSLTMEFDLVC----LCDFFVAWSQYWHLFGLLIGGVAATKLMRVLSPRQIYRTGIW 205
              :|.|...|:..||:|||    ..|.|.:........|.|:.|..|.:..|.|           
Mouse   125 GWVYDTPGSSIVTEFNLVCGDAWKVDLFQSCVNLGFFLGSLVVGYIADRFGRKL----------- 178

  Fly   206 CLLMCSL-------LMGLVKDFSLHCGLRCLAAVSCCFMITSGQYIFG-----DITAGKYRVGTL 258
            |||:.:|       |..:..|::.....|.|..     |::.|.::.|     :.....||..|.
Mouse   179 CLLVTTLVTSLSGVLTAVAPDYTSMLLFRLLQG-----MVSKGSWVSGYTLITEFVGSGYRRTTA 238

  Fly   259 ILYDCFWALGLILLPGLASNAPSWQHIYLGVTLSLLVIVFLLPWTPDSPRWQLQHTKEAQLAIER 323
            |||...:.:||:.|.|:|...|.|:.:.|.|:|...:.:....:.|:||||.|...:..|     
Mouse   239 ILYQVAFTVGLVGLAGVAYAIPDWRWLQLAVSLPTFLFLLYYWFVPESPRWLLSQKRTTQ----- 298

  Fly   324 TVGILLEAARTNGRMHKVSKELPQQLEELRERMLEPMPAVHWMHLWMGQRRSTFHLVAVHMALAT 388
            .|.|:.:.|:.|.::.....::....|:..||.   .|:...:......|:.|..|:.:..:.| 
Mouse   299 AVRIMEQIAQKNRKVPPADLKMMCLEEDASERR---SPSFADLFRTPSLRKHTLILMYLWFSCA- 359

  Fly   389 FMVVNTGLLLHVRSFGREHLVSNTLAMGLAEMLGCFLALHLTFNLSERKWQWAGGFAIVVGCIGS 453
              |:..||::||.:.| .:|..:.....|.|....|:.| :|.:...|.:..|....:.    |:
Mouse   360 --VLYQGLIMHVGATG-ANLYLDFFYSSLVEFPAAFIIL-VTIDRIGRIYPIAASNLVA----GA 416

  Fly   454 ICWFLAEEDMPEVYGLTLGLLMASLPQAAVACAQSMILACLGEL--VPMEQRSCLSFSAVTWARV 516
            .|                 |||..:|......  ::.|||||.:  ..:.|..||..:.:     
Mouse   417 AC-----------------LLMIFIPHELHWL--NVTLACLGRMGATIVLQMVCLVNAEL----- 457

  Fly   517 WQLSASFLTLLRQVSPALSLSAFCLLVILGGLGTCCLVTR 556
                  :.|.:|.:. .:..||.|   .|||:.|..:|.|
Mouse   458 ------YPTFIRNLG-MMVCSALC---DLGGIFTPFMVFR 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4465NP_650847.1 2A0119 67..553 CDD:273328 122/547 (22%)
MFS 169..>303 CDD:119392 33/145 (23%)
Slc22a1NP_033228.2 2A0119 12..525 CDD:273328 124/552 (22%)
MFS 125..515 CDD:119392 101/430 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167843613
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704438at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.850

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