DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4465 and Slc22a13

DIOPT Version :9

Sequence 1:NP_650847.1 Gene:CG4465 / 42374 FlyBaseID:FBgn0038750 Length:577 Species:Drosophila melanogaster
Sequence 2:NP_598741.2 Gene:Slc22a13 / 102570 MGIID:2143107 Length:551 Species:Mus musculus


Alignment Length:543 Identity:132/543 - (24%)
Similarity:210/543 - (38%) Gaps:96/543 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 MGNFGPWQLRSLLILFLCKIPAAWFMACILFTAPDLYPEEEYKC--------------------- 109
            :|:||.:|:|..:::.:....||:|:...:|...|    |.:.|                     
Mouse    11 VGDFGRFQVRLTILMGIPNFLAAFFIFGQVFMVLD----EAHHCSVSWVKNHTFNLSAAEQLAIS 71

  Fly   110 ---DTTA-------FGPDVNSTV---SLDHCYVMVNYGESAYAMRQCRKFLYTTGFHSLTMEFDL 161
               ||..       |.|..:|..   .|.|.:......:|.:...:.|.       .||..||||
Mouse    72 IPNDTAGRPESCLMFRPPPDSASLEDILSHRFNETQACDSGWDYPENRP-------QSLKKEFDL 129

  Fly   162 VCLCDFFVAWSQYWHLFGLLIGGVAATKLMRVLSPR-----QIYRTGIWCLLMCSLLMGLVKDFS 221
            ||........||...:.|||:|.:....:...:..|     |:..:||     .|:....|..|.
Mouse   130 VCDRKNLKKTSQSVFMAGLLVGALVFGPVCDWIGRRPSLLMQVLLSGI-----TSMATAFVSSFE 189

  Fly   222 LHCGLRCLAAVSCCFMITSGQYIFGDITAGKYRVGTLILYDCFWALGLILLPGLASNAPSWQHIY 286
            |:..||.:.|.:....:.|...:..:.....:|...::|.....|||.::|.|||....:|:.:.
Mouse   190 LYLALRFVLATANAGFLLSTNVLISEWVGPSWRTQAVVLAQSNVALGQMVLAGLAYGVRNWRLLQ 254

  Fly   287 LGVTLSLLVIVFLLPWTPDSPRWQLQ--HTKEAQLAIERTVGILLEAARTNGRMHKVSKELPQQL 349
            :..|..:|::.|.....|:||||.|.  .|:||:..:::       ||..|||  .:|.||..||
Mouse   255 ITGTAPVLLLFFYFWVLPESPRWLLSQGRTEEAKQLVQK-------AALVNGR--PLSPELLNQL 310

  Fly   350 -EELRERMLEPMPAVHWMHLWMGQRRSTFHLVAVHMALATFMVVNTGLLLHVRSFGREHLVSNTL 413
             .|........:......||    |:.|..|:||....:   :|...|...|..||.:..|:. |
Mouse   311 VPEKTGPSGNALDLFRHPHL----RKVTLILIAVWFVDS---LVYYSLSFQVGDFGLDIYVTQ-L 367

  Fly   414 AMGLAEMLGCFLALHLTFNLSERKWQ------WAGGFAIVVGCIGSICWFLAEEDMPEVYGLTLG 472
            ..|..||.|.||::.:...|. |||.      .||...|::        .....|:|     |:.
Mouse   368 IFGAVEMPGRFLSVLMMEKLG-RKWSQLCTLTLAGIMYIII--------IFIPGDLP-----TVV 418

  Fly   473 LLMASLPQAAVACAQSMILACLGELVPMEQRSCLSFSAVTWARVWQLSASFLTLLRQVSPALSLS 537
            .::|.:.:.|.|.|.::......||.|...|.........::||..:....:.||.|...|:.:.
Mouse   419 TVLAVVGKFASAAAFTISYVYTAELFPTIIRQTGMGLVSIFSRVGGIITPLVMLLEQYHQAIPMV 483

  Fly   538 AFCLLVILGGLGTCCLVTRDKEQ 560
            .|..|.|..|| .|.|:...:.|
Mouse   484 IFGSLPIGAGL-LCALLPETRGQ 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4465NP_650847.1 2A0119 67..553 CDD:273328 130/533 (24%)
MFS 169..>303 CDD:119392 31/138 (22%)
Slc22a13NP_598741.2 2A0119 12..510 CDD:273328 132/542 (24%)
MFS 139..500 CDD:119392 102/397 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167843568
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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