DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP92B and RGA1

DIOPT Version :10

Sequence 1:NP_650844.1 Gene:RhoGAP92B / 42371 FlyBaseID:FBgn0038747 Length:740 Species:Drosophila melanogaster
Sequence 2:NP_014770.1 Gene:RGA1 / 854294 SGDID:S000005653 Length:1007 Species:Saccharomyces cerevisiae


Alignment Length:459 Identity:101/459 - (22%)
Similarity:180/459 - (39%) Gaps:109/459 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 SGSSEEQDKRTKKNSHYKIAQALDESAKEL-PKDMPLQKVLANCGELEKTMAECIIESELETEAK 123
            |.:.|||.:...:||..:...:||   ||: ..:..|:::..|..|||....|            
Yeast   579 SDNFEEQKETLYENSESRNDPSLD---KEIVTAEHYLKQLKINLKELESQREE------------ 628

  Fly   124 VVRRLKNILDKEIQEISTLKRNVSRTLQEYTSLKR-----SHEAA--------IRLEEPAAKVNH 175
                    |.|||.|:.::|..:.|.::.|.|.|.     |:|.:        |.|.| :..|.|
Yeast   629 --------LMKEITEMKSMKEALRRHIESYNSEKNKLYLDSNELSNNPPMINEISLGE-SPPVKH 684

  Fly   176 IKSQQ---------------EECELKLEKERDAWAAQMLELIAKEDEIVSC------------IR 213
            :.:..               ...:.:.|:.....:......|.|...::..            |.
Yeast   685 VATASSVARSSVKPKFWKFFSSAKPQTEQSIQGVSTNNTNSIVKSAPVLLSAPSSGSNSGRLEIS 749

  Fly   214 DYVL-NQRNYHERALQHV--NASLARIQDTIQGTEKSR-FGTSLKEHLTSTNREISYIVELCCCC 274
            ..|| |...:.:..|..:  :|::.:.:|..:..:.|. :|:||.......|.||..|:.:|...
Yeast   750 PPVLQNPNEFSDVRLVPIENDANMGQSKDGEEYLDGSNLYGSSLVARCNYENNEIPMILSVCIDF 814

  Fly   275 LL--EHGLEEEGLLRVGCASTKLRRMKHALEA----QHVKTPLPLDYQDPHVIGSILKLYLRELP 333
            :.  |..:..||:.|...:...:..::....|    |:.:||..|..||.:|:..:||.|||:||
Yeast   815 IESDEENMRSEGIYRKSGSQLVIEEIEKQFSAWKVQQNTETPNILTEQDLNVVTGVLKRYLRKLP 879

  Fly   334 EPLLTYNLYKDFIRIAERHSEAER---------------------KTEIKAILTKLPKENYANLR 377
            .|:.|:.:|:..:|:.:.....|.                     |:.:|.||..||:|:|..||
Yeast   880 NPIFTFQIYEPLMRLVKSKKMMENLPFVGGKLSLEAKNSDTYMSSKSALKNILEDLPREHYRVLR 944

  Fly   378 YLTRFLSIVQQRSALNKMSSQNLAIVMSPNMLWPRIDKSSNAPADYIGQ--VNSSSAANIIVELL 440
            .|:..:..|.:.|..|:|:..|||:|.:|.::           .|:.|:  :......|.||..:
Yeast   945 VLSEHIEKVTRYSHWNRMTLYNLALVFAPGLI-----------RDFSGEKDIIDMKERNYIVAFI 998

  Fly   441 ISQW 444
            ...:
Yeast   999 FGNY 1002

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP92BNP_650844.1 BAR 27..257 CDD:472257 47/241 (20%)
RhoGAP_nadrin 245..452 CDD:239851 58/230 (25%)
PRK13855 495..>650 CDD:172376
RGA1NP_014770.1 LIM1_Rga 13..67 CDD:188780
LIM2_Rga 70..123 CDD:188781
RhoGAP 803..1002 CDD:214618 53/209 (25%)
Blue background indicates that the domain is not in the aligned region.

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