DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP92B and AT5G22400

DIOPT Version :9

Sequence 1:NP_001287417.1 Gene:RhoGAP92B / 42371 FlyBaseID:FBgn0038747 Length:740 Species:Drosophila melanogaster
Sequence 2:NP_197632.1 Gene:AT5G22400 / 832301 AraportID:AT5G22400 Length:466 Species:Arabidopsis thaliana


Alignment Length:364 Identity:79/364 - (21%)
Similarity:142/364 - (39%) Gaps:92/364 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   249 FGTSLKEHLTSTNREISYIVELCC----------CCLLEHGLEEEGLLRVGCASTKLRRMKHALE 303
            ||.|      :.:.::||.....|          |...:.||:.||:.|:...:::...::..|.
plant   160 FGVS------TESMQLSYDSRGNCVPTILLLMQNCLYSQGGLQAEGIFRLTAENSEEEAVREQLN 218

  Fly   304 AQHVKTPLPLDYQDPHVIGSILKLYLRELPEPLLTYNLYKDFIRIAERHSEAERKTEIKAILTKL 368
            ...:...:     |.|.:..::|.:.||||..:|      |.:. .|:..:.:.:.|...::..|
plant   219 RGFIPERI-----DVHCLAGLIKAWFRELPTSVL------DSLS-PEQVMQCQTEEENVELVRLL 271

  Fly   369 PKENYANLRYLTRFLSIVQQRSALNKMSSQNLAIVMSPNMLWPRIDKSSNAPADYIGQVNSSSAA 433
            |....|.|.:....::.|.|...||||:|:|:|:|.:|||  .::|....| ..|..||.:    
plant   272 PPTEAALLDWAINLMADVVQYEHLNKMNSRNIAMVFAPNM--TQMDDPLTA-LMYAVQVMN---- 329

  Fly   434 NIIVELLISQWDYFFIGEVEFYLTL-QKQKLFVE----------GKSKSNSSNENLDRNDSEVME 487
              .::.||.:             || ::|...||          .:|...|.:::|..|.||..|
plant   330 --FLKTLIEK-------------TLRERQDSVVEQAHAFPLEPSDESGHQSPSQSLAFNTSEQSE 379

  Fly   488 SPRYGTLRRQKANAPSPPTTNGNGIIMTTSQTSHRPHAKELFPQQTPEKQEKPAKPPLPNLPQFQ 552
            .                  |..:.|....:|:|....:.||..:....:|.:      .:..:::
plant   380 E------------------TQSDNIENAENQSSSSEISDELTLENNACEQRE------TDFGKYR 420

  Fly   553 SPAASQPTQTQLEPLPPPPVTPAKPVPMTRTQFFGLDNL 591
            :...|..:|..:..|.||     ...|:.||:  ||.||
plant   421 TGRLSDSSQQVVLNLDPP-----AQWPVGRTK--GLTNL 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP92BNP_001287417.1 BAR 27..257 CDD:299863 3/7 (43%)
RhoGAP_nadrin 245..452 CDD:239851 48/212 (23%)
AT5G22400NP_197632.1 CRIB 115..155 CDD:238077
RhoGAP 178..337 CDD:214618 42/179 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4270
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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