DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP92B and REN1

DIOPT Version :9

Sequence 1:NP_001287417.1 Gene:RhoGAP92B / 42371 FlyBaseID:FBgn0038747 Length:740 Species:Drosophila melanogaster
Sequence 2:NP_001320057.1 Gene:REN1 / 828560 AraportID:AT4G24580 Length:920 Species:Arabidopsis thaliana


Alignment Length:452 Identity:94/452 - (20%)
Similarity:157/452 - (34%) Gaps:95/452 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   278 HGLEEEGLLRVGCASTKLRRMKHAL-EAQHVKTPLPLDYQDPHVIGSILKLYLRELPE---PLLT 338
            ||:..||:||   .:..:..::|.: |.:..|.....: :|.|:|...||.:|||||.   |...
plant   235 HGVRIEGILR---QAADVDDVEHRIREYEKGKNEFSPE-EDAHIIADCLKYFLRELPSSPVPASC 295

  Fly   339 YNLYKDFIRIAERHSEAERKTEIK-AILTKLPKENYANLRYLTRFLSIVQQRSALNKMSSQNLAI 402
            .|...:    |.|.....|...:: ||....|:.|...|:.:...:..|.....:|:|::..:|.
plant   296 CNALLE----ACRTDRGNRVNAMRAAICESFPEPNRRLLQRILMMMQTVASNKTVNRMNTNAVAA 356

  Fly   403 VMSPNMLWPRIDKSSNAPADY-IG------QVNSSSAAN---IIVELLISQWDYFFIGEVEFYLT 457
            .|:|.:|.|.:........|: :|      .:.:::|||   .||..|:.:::..| ||......
plant   357 CMAPLLLRPLLAGDCEIENDFDVGGDGSMQLLQAAAAANHAQAIVITLLEEYESIF-GEGSLSPG 420

  Fly   458 LQKQKLFVEGKSKSNSSNENLDRNDSEVMESPRYGTLRRQKANAPSPPTTNGNGIIMTTSQTSHR 522
            |..........::..|.:|..|.:|.....|..|........|     .:||:   .:.|..|..
plant   421 LYSDSEESGSGTEEGSDDEEYDDDDDGSQGSEDYTDEEEDLEN-----ESNGS---YSESAASED 477

  Fly   523 PHAKELFPQ--------QTPEKQEKPAKPP--------LPNLPQFQSPAASQPTQTQLEPLPPPP 571
            .:|..:.|.        .|..|..|.:|.|        ..:||:.......:....:        
plant   478 KYADSIDPDDHKINDNLSTESKSPKRSKEPKKLLSGSRRSSLPRHDDGKKDEDIVVK-------- 534

  Fly   572 VTPAKPVPMTRTQFFGLDNLP-------SPTADRKSTDSIGSFKLKPDVPQKPLLPKRPTVLGVG 629
                           |::|..       |.:.|:.|:.|        ||......|.:       
plant   535 ---------------GVNNTEVKAVVEVSTSEDKNSSTS--------DVASDTQKPSK------- 569

  Fly   630 VPKADGKSDDEGGTTPTQATIDNGNGSVRFKTEHFLDKLRQENGETNGTREVSSTTKENNHN 691
            :..|.|.|....|.||.:..:  ...|:.|..|...|....|..|:......|..|:|...|
plant   570 LSDAPGGSKRHWGRTPGKKNL--SMESIDFSVEVDEDNADIERLESTKLELQSRITEEVKSN 629

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP92BNP_001287417.1 BAR 27..257 CDD:299863
RhoGAP_nadrin 245..452 CDD:239851 47/188 (25%)
REN1NP_001320057.1 PH 61..166 CDD:395117
RhoGAP 222..360 CDD:395495 34/132 (26%)
SMC_prok_B <600..>845 CDD:274008 8/30 (27%)
Lzipper-MIP1 642..720 CDD:405138
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 54 1.000 Inparanoid score I2605
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.960

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