DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RhoGAP92B and ROPGAP3

DIOPT Version :10

Sequence 1:NP_650844.1 Gene:RhoGAP92B / 42371 FlyBaseID:FBgn0038747 Length:740 Species:Drosophila melanogaster
Sequence 2:NP_850458.1 Gene:ROPGAP3 / 819283 AraportID:AT2G46710 Length:455 Species:Arabidopsis thaliana


Alignment Length:284 Identity:56/284 - (19%)
Similarity:105/284 - (36%) Gaps:80/284 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   277 EHGLEEEGLLRVGCASTKLRRMKHALEAQHVKTPLPLDYQDPHVIGSILKLYLRELPEPLLTYNL 341
            |.||:.||:.|:...:.|...::..|....|...:     |.|.:..::|.:.||||..:|.   
plant   180 EGGLKAEGIFRINPDNGKEEHVRRQLNCGVVPRGI-----DVHCLAGLIKAWFRELPTGVLD--- 236

  Fly   342 YKDFIRIAERHSEAERKTEIKAILTKLPKENYANLRYLTRFLSIVQQRSALNKMSSQNLAIVMSP 406
                :...|:......:.:...::..||....|.|.:....::.|.:....|||:::|:|:|.:|
plant   237 ----VLTPEQVMRCNTEEDCSRLVILLPPVESAILDWAIGLMADVVEHEQFNKMNARNVAMVFAP 297

  Fly   407 NMLWPRIDKSSNAPADYI-GQVNSSSAANIIVELLI------------SQWDYFFIGEVEFYLTL 458
            ||         ...||.: ..:::....|.:..|::            ::|             |
plant   298 NM---------TQMADPLTALIHAVQVMNFLKTLILMNLKERENADAKARW-------------L 340

  Fly   459 QKQKLFVEGKSKSNSSNENLDRNDSEVM--ESP--------RYGTLRRQKANAPSP--------- 504
            :||         ::..:|..:...||::  |.|        |..||.|.:|:....         
plant   341 KKQ---------TSDPSEEWESQHSEILSPEKPNNNNPKFLRVATLCRLEADNEEEFWNIKKRND 396

  Fly   505 -----PTTNGNGIIMTTSQTSHRP 523
                 .|::|||.|....:....|
plant   397 HEGVLDTSSGNGNIGPVQRLCKHP 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP92BNP_650844.1 BAR 27..257 CDD:472257
RhoGAP_nadrin 245..452 CDD:239851 37/187 (20%)
PRK13855 495..>650 CDD:172376 8/43 (19%)
ROPGAP3NP_850458.1 CRIB 103..143 CDD:238077
RhoGAP 167..323 CDD:238090 35/163 (21%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.