DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP92B and fam13b

DIOPT Version :9

Sequence 1:NP_001287417.1 Gene:RhoGAP92B / 42371 FlyBaseID:FBgn0038747 Length:740 Species:Drosophila melanogaster
Sequence 2:NP_001314971.1 Gene:fam13b / 568603 ZFINID:ZDB-GENE-030131-4913 Length:961 Species:Danio rerio


Alignment Length:417 Identity:97/417 - (23%)
Similarity:169/417 - (40%) Gaps:69/417 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   237 IQDTIQGTEKSRFGTSLKE--HLTSTNREISYIVELCCCCLLEHGLEEEGLLRVGCASTKLRRMK 299
            :.|::..|..  ||..|:|  |......|:..:|......:.|||.....|..|...:.::..::
Zfish     9 LSDSLSTTRV--FGIPLEEVQHSGQPGHEVPLLVRSIVEYIEEHGGLHLSLFLVNGNAERVEWLR 71

  Fly   300 HALEAQHVKTPLPLDYQDPHVIGSILKLYLRELPEPLLTYNLYKDFIRIAERHS-EAERKTEIKA 363
            ...:: .|:..|..:......: |:|:|:|:|||||::...|....:::.:.:| |.|....:|.
Zfish    72 QRYDS-GVEVNLEKEADLASAV-SLLRLFLQELPEPIIPAGLQAQIMQLYQDYSIEEELGRNMKY 134

  Fly   364 ILTKLPKENYANLRYLTRFLSIV---QQRSALNKMSSQNLAIVMSPNMLWPRIDKSSNAPADYIG 425
            .|.:||:.||:.||:|.||||.|   |:.|    .|...||.|..|::.        :...|...
Zfish   135 FLQQLPQVNYSLLRFLCRFLSGVASLQEES----WSLGALAAVFGPDIF--------HLDTDVED 187

  Fly   426 QVNSSSAANIIVELLISQWDYF-----FIGEVEFYLTLQKQKLFVEGKSKSNSSNE-NLDRNDSE 484
            .....|.:.|:.|||.:|.::|     .|.....|.::..|...:..:.|.::..| ..|..|..
Zfish   188 LKEQESVSRILAELLENQEEFFESEDEDISNTNDYSSINDQITELLEEEKLDACEELPRDGEDGP 252

  Fly   485 VMESPRYGTLRRQKANAPSPPT--------TNGNGIIMTTSQTSHRPHAKELFPQQTP------- 534
            ...||::..:      |||..:        .....||..|.:.:...|..:|   ||.       
Zfish   253 SSLSPKHAQV------APSSSSHIASISILPGSADIIQRTIRAAVEQHLLDL---QTSIDKELGS 308

  Fly   535 -EKQEKPAKPPLPNLPQFQSPAASQ----PTQTQLEPLPPPPVTPAKPVPMTRTQFFGLDNLPSP 594
             |.|...:||...|.|..::|....    .::::.|....|.|| .:.:|...::......|.||
Zfish   309 YESQVLDSKPIHGNSPTLKTPGPEDHEDVQSESEAETETLPEVT-EEGLPSENSEESQGSQLSSP 372

  Fly   595 TADRKS-----------TDSIGSFKLK 610
            ..:..|           |:|:|:.:|:
Zfish   373 IMEESSGMDLDTETLIETESLGAERLE 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP92BNP_001287417.1 BAR 27..257 CDD:299863 6/21 (29%)
RhoGAP_nadrin 245..452 CDD:239851 57/217 (26%)
fam13bNP_001314971.1 RhoGAP_FAM13A1a 17..204 CDD:239858 54/202 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4270
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.900

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