DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP92B and arhgap8

DIOPT Version :9

Sequence 1:NP_001287417.1 Gene:RhoGAP92B / 42371 FlyBaseID:FBgn0038747 Length:740 Species:Drosophila melanogaster
Sequence 2:NP_001016951.1 Gene:arhgap8 / 549705 XenbaseID:XB-GENE-6455435 Length:420 Species:Xenopus tropicalis


Alignment Length:500 Identity:125/500 - (25%)
Similarity:195/500 - (39%) Gaps:152/500 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 DSKDSE-LEAIERQVDRYRDTIEKIVRKL--PALSGGGGSGSGSSEEQDKRTKKNSHYKIAQALD 83
            ||.|.| |..||.|.|      |:.:..|  |.:|||               :|.|...|.....
 Frog     2 DSVDFEKLAEIELQKD------EEDLEYLGPPVVSGG---------------RKPSDVCIGHPYY 45

  Fly    84 ESAKE-----LPKDMPLQKV-------LANCGELEKTMAECIIESELETEAKVVRRLKNILDKEI 136
            :.|:.     :..|...:||       |..|.|::              ..::::.:|:.||:.:
 Frog    46 DIARHGILHVVGDDNSGRKVITFSCCRLPPCHEID--------------HVRLLQYMKHTLDQYV 96

  Fly   137 QEISTLKRNVSRTLQEYTSLKRSHEAAIRLEEPAAKVNHIKSQQEECELKLEKERDA-------- 193
            :             .:|| |...|.......:|:  :..::|..:|.:.|.:|...|        
 Frog    97 E-------------NDYT-LVYFHYGLNSRNKPS--LGWLQSAYKEFDRKYKKNLKALYVVHPTN 145

  Fly   194 -----WAAQMLELIAKEDEIVSCIRDYVLNQRNYH---------ERALQHVNASLARIQDTIQGT 244
                 |......:..|..:.|..::|  ||:.:.|         ...|||.....|.     :|.
 Frog   146 FIKVLWNIFKPIISHKFGKKVLYMKD--LNELHEHLKFNRLIIPPEVLQHDEKLRAH-----KGK 203

  Fly   245 EKS-------------RFGTSLKEHLTSTN----------REISYIVELCCCCLLEHGLEEEGLL 286
            ..|             :||.:| :::.:.|          :.|||        |.:.||..|||.
 Frog   204 PSSAKSPPPRPPLPTQQFGVTL-QYIRNKNNGDLIPPVMVQTISY--------LKQKGLRTEGLF 259

  Fly   287 RVGCASTKLRRMKHALEAQHVKTPLPLD-YQDPHVIGSILKLYLRELPEPLLTYNLY---KDFIR 347
            |   .|..:..:|...:..:|..|:..| |.:.|:...|||.:|||||||||||:.|   :|.|.
 Frog   260 R---RSVSVHILKDVQKLYNVGKPVNFDTYDNIHIPAVILKTFLRELPEPLLTYDSYGPIQDIIG 321

  Fly   348 IAERHSEAERKTEIKAILTKLPKENYANLRYLTRFLSIVQQRSALNKMSSQNLAIVMSPNMLWPR 412
            :    ..:.|.|..:.|:.|||:.|||.|:||..||.:|.|:...|||:|.||..:...|::|.|
 Frog   322 V----ESSLRVTRCRQIVQKLPEHNYAVLKYLLCFLHLVCQQHIHNKMTSSNLGCIFGLNLIWQR 382

  Fly   413 IDKSSNAPADYIGQVNSSSAANIIVELLISQWDYFFI-----GEV 452
                     :.|..:|:....|:..||||..:...|.     |||
 Frog   383 ---------EQIQSLNALVPVNLFAELLIEFYPQIFSPKSVPGEV 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP92BNP_001287417.1 BAR 27..257 CDD:299863 51/279 (18%)
RhoGAP_nadrin 245..452 CDD:239851 73/238 (31%)
arhgap8NP_001016951.1 CRAL_TRIO_2 62..184 CDD:290435 25/153 (16%)
RhoGAP 218..409 CDD:295372 70/215 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1511935at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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