DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP92B and Arhgap24

DIOPT Version :10

Sequence 1:NP_650844.1 Gene:RhoGAP92B / 42371 FlyBaseID:FBgn0038747 Length:740 Species:Drosophila melanogaster
Sequence 2:XP_038947751.1 Gene:Arhgap24 / 305156 RGDID:1306669 Length:785 Species:Rattus norvegicus


Alignment Length:537 Identity:126/537 - (23%)
Similarity:226/537 - (42%) Gaps:115/537 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   236 RIQDTIQGTEKSRFGTSLKEHLTSTNREISYIVELCCCCLLEHGLEEEGLLRVGCASTKLRRMKH 300
            :::||::  .:.|:|          ||....:||.|...:.:.||:||||.|:...:..::.::.
  Rat   172 KLEDTVR--YEKRYG----------NRLAPMLVEQCVDFIRQRGLKEEGLFRLPGQANLVKELQD 224

  Fly   301 ALEAQHVKTPLPLDYQDPHVIGSILKLYLRELPEPLLTYNLYKDFIRIAERHSEAERK--TEIKA 363
            |.:..  :.|......|.|.:.|:|||||||||||::.|..|:||:..|...|:.|..  .|:..
  Rat   225 AFDCG--EKPSFDSNTDVHTVASLLKLYLRELPEPVVPYAKYEDFLSCATLLSKEEEAGVKELTK 287

  Fly   364 ILTKLPKENYANLRYLTRFLSIVQQRSALNKMSSQNLAIVMSPNMLWPRIDKSSNAPADYIGQVN 428
            .:..||..||..|:|:.|||..||..|.:||||:||||.|..||:|.|:::       |.:..:.
  Rat   288 QVKSLPVVNYNLLKYICRFLDEVQSYSGVNKMSAQNLATVFGPNILRPKVE-------DPLTIME 345

  Fly   429 SSSAANIIVELLISQWDYFFIGEVEFYLTLQKQKLFVEGKSKSNSSN---------ENLDRNDSE 484
            .:.....::.::||:.|..|..:.|      .|....||.:.:|:..         :|.:.|:::
  Rat   346 GTVVVQQLMSVMISKHDRLFPKDTE------PQSKPQEGPNSNNNDGHKKVTMGQLQNKENNNTK 404

  Fly   485 VMESPRYGTLRRQKANAPSPP----TTNGNGIIMTTSQTSHRPHAKELFPQQTPEKQEKPAKPPL 545
              |||    :||...:.|..|    ..||:...::.|:|:.        |:.:..|.:....|||
  Rat   405 --ESP----VRRCSWDKPESPQRSSMDNGSPTALSGSKTNS--------PRNSIHKLDVSRSPPL 455

  Fly   546 --PNLPQFQSPAA----SQPTQTQLEPLPPPPVTPAKPVPMTRTQFFGLDNLPSPTADRKSTDSI 604
              ...|.|...:.    ...:.:..|.:.....||...:...||     .:|.| :..:..|.|:
  Rat   456 TVKKNPAFNKGSGIVTNGSFSSSNAEGVEKTQTTPNGSLQARRT-----SSLKS-SGTKMGTHSV 514

  Fly   605 GSFKLKPDVPQKPLLPKRPTVLGVGVPKADGKSDDEGGTTPTQATIDNGNGSVRFKTEHFLDKLR 669
            .:..::                 :|:...|...:...|.  :.:.:.||..::|.      :|.:
  Rat   515 QNGTVR-----------------MGILNTDTLGNSLNGR--SMSWLPNGYVTLRD------NKQK 554

  Fly   670 QENGETNGTREVSSTTKENNH------NHDPPATAADQNQQQAQPQVTTPISPNSFQT-----PK 723
            :..||:.....:|  |.:|.|      |.|...:........:..:::.|.:.||.::     |:
  Rat   555 EPAGESGQHNRLS--TYDNVHQQFSLMNLDDKHSVDSATWSTSSCEISLPENSNSCRSSTTTCPE 617

  Fly   724 R---------PTVPAPP 731
            :         |.:..||
  Rat   618 QDFYGGNFEDPVLDGPP 634

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP92BNP_650844.1 BAR 27..257 CDD:472257 4/20 (20%)
RhoGAP_nadrin 245..452 CDD:239851 68/208 (33%)
PRK13855 495..>650 CDD:172376 27/164 (16%)
Arhgap24XP_038947751.1 PH_RhoGap24 54..167 CDD:241530
RhoGAP_ARHGAP22_24_25 167..365 CDD:239855 69/213 (32%)
ERM_helical 689..>762 CDD:466641
Blue background indicates that the domain is not in the aligned region.

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