DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP92B and Prune2

DIOPT Version :10

Sequence 1:NP_650844.1 Gene:RhoGAP92B / 42371 FlyBaseID:FBgn0038747 Length:740 Species:Drosophila melanogaster
Sequence 2:NP_001406496.1 Gene:Prune2 / 293823 RGDID:1311350 Length:3080 Species:Rattus norvegicus


Alignment Length:812 Identity:151/812 - (18%)
Similarity:273/812 - (33%) Gaps:226/812 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 NLSRSSKSDSKDSELEAIERQVDRYRDTIEKIVRKLPALSGGGGSGSGSSEEQDKRTKKNS---H 75
            :||.:|...|::|| ||:|.:.:.|  |::.:         .|.:.:.:|:.|.|.|.:.|   :
  Rat  1377 SLSVTSSPQSEESE-EALEVEKEPY--TLDSL---------AGQTETPTSDSQTKDTHEESLMDN 1429

  Fly    76 YKIAQA---LDESAKELPKDMPLQKVLANCGELEKTMAECIIESELETEAKVVRRLKNI------ 131
            ..:.:|   ||..  .|.|:|||.::     |||:|.|..|:..|.|....:....:|.      
  Rat  1430 RNLEEANTTLDRI--NLIKNMPLSEM-----ELEETEACNILRPERENGKLIYESSQNFGVWDGP 1487

  Fly   132 ---------LDKEIQEISTLKRNVSRTLQ--------------EYTSLKRS----HEAAIRLEE- 168
                     :..||....|.:|...|:|:              |.|....|    :::::.|.. 
  Rat  1488 TDSDVWDSHISYEIAMNPTCQRTEERSLEALSPGNYDKDSLSSECTRSSASSPDLNDSSVALSSW 1552

  Fly   169 ---PAAKVNHIKSQQEECELKLEKERDAWAAQM-LELIAKEDEIVSCIRDYVLNQRNYHERALQH 229
               |:|  :|....|::...::.:|.:.:..:. :.:|.:..:.....:|...|..:..:.....
  Rat  1553 TYGPSA--DHQNENQDDRNKQIHQEPELFTTEAHVGVITEMKDFAKPRKDEFGNMSDQEDPQFPA 1615

  Fly   230 VNASLARIQDTIQGTEKSRFGTSLKEHLTSTNREISYIVELCCCCLLEHGLEEEGLLRVGCASTK 294
            ::      .|...|      |:|.......|::...|          .|..:|..|:..|....:
  Rat  1616 IS------NDPFNG------GSSSSSSSLGTDKYSEY----------SHAYQEGNLMTRGQEENE 1658

  Fly   295 LRRMKHA-LEAQHVKTPLPLDYQDPHVIGSILKLYLRELPEPLLTYNLYKDFIRIAERHSEAERK 358
            |..::.| .|...:   :.......|..|...:|..:||           ....:|:|.||    
  Rat  1659 LNSLEIAEPEGSRI---ISTSSGSGHDSGGEEELLEKEL-----------HLATVAQRESE---- 1705

  Fly   359 TEIKAILTKLPKENYANLRYLTRFLSIVQQRSALNKM--SSQNLAIVMSPNMLWPRIDKSSNAPA 421
                 :...||.         ..||...|.:..|:..  ||:.   :.:.|...|..|...::| 
  Rat  1706 -----VCNSLPD---------PEFLVTEQSKPELSVFVGSSEP---IENENKSSPFYDSQQSSP- 1752

  Fly   422 DYIGQVNSSSAANIIVELLISQWDYFFIGEVEFYLTLQKQK-----------LFVEGKSKSNSSN 475
                                .||....:.:.:...|.::::           ...:|.:.::..|
  Rat  1753 --------------------GQWILSPLVQADIQDTSKEEEARGADTGTVMDTMWQGSASTDRKN 1797

  Fly   476 ENLDRNDSEVMESPRYGT---------LRRQKANA--PSPPTTNGNGIIMTTSQTSHRPHAKELF 529
                 .|.:.:|...:.|         .|..||.|  .:...:|..|.:.|||     |..:...
  Rat  1798 -----GDPDTLEMLGFSTDSSEWWNPAARDGKATASVSAEELSNSEGELETTS-----PIFQNAG 1852

  Fly   530 PQQTP-EKQEKPAKPPLPNLP---QFQSP---AASQPTQTQLEPLPPPPVTPAKPVPMTRTQFFG 587
            |...| :...||......| |   :.:||   :....:|.:|..:.|      |.:.....||..
  Rat  1853 PWSVPVQDDSKPVDTGSTN-PFSGELKSPFLDSDGDKSQEKLWNIQP------KQLDSDANQFSQ 1910

  Fly   588 LDNLPSPTADRKSTDSIGSFKLKPDVPQKPLLPK--RPTVL------GVGVPKADGKSDDEGGTT 644
            |..| ....|:.|...........|:|.:.|..:  :.::|      |..:...|.......|.:
  Rat  1911 LVIL-DQIKDKDSGQQTAMSSTAGDLPSETLAQEQCQESMLSVWDHAGPALTHRDENGCVSAGIS 1974

  Fly   645 PTQATIDNGNGSVRFKTEHF---------LDKLRQENGETNGTREVSS-----TTKENNHNHDPP 695
            ||:...:||....:....|.         |||:   |..|...|:..|     :..|:.||..|.
  Rat  1975 PTECQQENGWEPEKSYLSHVTHSRTPTENLDKI---NAPTQLIRKPDSDWDSPSPSEHQHNFVPD 2036

  Fly   696 ATAA--DQNQQQAQPQVTTPISPNSFQTPKRP 725
            ....  ::..|.|.      .||:.:...|:|
  Rat  2037 ILHGNFEEGGQLAS------ASPDLWMDVKQP 2062

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP92BNP_650844.1 BAR 27..257 CDD:472257 51/273 (19%)
RhoGAP_nadrin 245..452 CDD:239851 34/209 (16%)
PRK13855 495..>650 CDD:172376 37/171 (22%)
Prune2NP_001406496.1 DHHA2 214..>277 CDD:460719
BNIP2 2778..2895 CDD:463609
CRAL_TRIO_2 2897..3034 CDD:463965
Blue background indicates that the domain is not in the aligned region.

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