DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP92B and rga-1

DIOPT Version :10

Sequence 1:NP_650844.1 Gene:RhoGAP92B / 42371 FlyBaseID:FBgn0038747 Length:740 Species:Drosophila melanogaster
Sequence 2:NP_001022390.1 Gene:rga-1 / 174751 WormBaseID:WBGene00012203 Length:444 Species:Caenorhabditis elegans


Alignment Length:361 Identity:86/361 - (23%)
Similarity:150/361 - (41%) Gaps:70/361 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 AKVVRRLKNILDKEIQEISTL-----------KRNVSRTLQEYTSLKRSHE---AAIRLEEPAAK 172
            |::::.|..|:||.:.:..|:           |..|....|.|..|.|..:   .|:.:..|...
 Worm   112 ARLLQYLVQIIDKIVDQDYTIVYFHYGLRSHNKPPVRWLFQAYKQLDRRFKKNLKALYVVHPTRF 176

  Fly   173 V--------NHIKSQQEE------CELKLEKERDAWAAQMLELIAKEDEIVSCIRDYVLNQRNYH 223
            :        ..|.|:.|.      |..:||   :|.:...|.|       .|.|||        |
 Worm   177 IRIIFSLFKGFISSKFENKFHYVMCIDELE---NALSVARLNL-------PSPIRD--------H 223

  Fly   224 ERALQHVNASLARIQDT--IQGTEKSRFGTSLKEHLTSTNREISYIVELCCCCLLEHGLEEEGLL 286
            :::.    ::.:...:|  .|.....:||..|:..|:.....|..||:.....|..|.|..||:.
 Worm   224 DKSF----STQSNRPETPPAQPLPTQQFGVPLEFILSHCGGNIPPIVDQLIEYLEAHALTMEGVF 284

  Fly   287 RVGCASTKLRRMKHAL-EAQHVKTPLPLDYQDPHVIGS-----ILKLYLRELPEPLLTYNLYKDF 345
            |.......::|::..: :.:.:......:|:|...:.|     :||.:.|.|.|||.|..||...
 Worm   285 RKSANIGSIKRLQDRINKGEKIDFENDPEYKDNEYVASLHASVLLKTFFRSLGEPLTTNRLYPKL 349

  Fly   346 IRIAERHSEAERKTEIKAILTKLPKENYANLRYLTRFLSIVQQRSALNKMSSQNLAIVMSPNMLW 410
            ..::| .|:.|:...:|..:..||:|||..|:.:.:||:.|.:.|.:|.|::.||::|..||:.|
 Worm   350 AALSE-VSKTEKSAAVKEFVKLLPRENYILLKTVIKFLTRVAENSKVNLMTANNLSVVFGPNLTW 413

  Fly   411 PRIDKSSNAPADYIGQVNSSSAANIIVELLISQWDY 446
            |   .....|...:..:|     |...:|::   ||
 Worm   414 P---TDQEVPISQLNNLN-----NFCYKLIV---DY 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP92BNP_650844.1 BAR 27..257 CDD:472257 33/164 (20%)
RhoGAP_nadrin 245..452 CDD:239851 56/208 (27%)
PRK13855 495..>650 CDD:172376
rga-1NP_001022390.1 CRAL_TRIO_2 92..225 CDD:463965 28/130 (22%)
RhoGAP 242..442 CDD:470621 56/209 (27%)
Blue background indicates that the domain is not in the aligned region.

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