DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP92B and arhgap24

DIOPT Version :9

Sequence 1:NP_001287417.1 Gene:RhoGAP92B / 42371 FlyBaseID:FBgn0038747 Length:740 Species:Drosophila melanogaster
Sequence 2:XP_001339010.2 Gene:arhgap24 / 100005116 ZFINID:ZDB-GENE-091118-20 Length:752 Species:Danio rerio


Alignment Length:491 Identity:129/491 - (26%)
Similarity:196/491 - (39%) Gaps:111/491 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   249 FGTSLKEHLTST----NREISYIVELCCCCLLEHGLEEEGLLRVGCASTKLRRMKHALEAQHVKT 309
            ||..|:|.:...    |:....:||.|...:...||.||||.|:...:..::.::.|.:... |.
Zfish   136 FGQKLEETVRYERRYGNKMAPMLVEQCVDFIRNWGLREEGLFRLPGQANLVKELQDAFDCGE-KP 199

  Fly   310 PLPLDYQDPHVIGSILKLYLRELPEPLLTYNLYKDFI---RIAERHSEAERKTEIKAILTKLPKE 371
            ....: .|.|.:.|:|||||||||||::.::.|::|:   ::..:..||..| |::..:..||..
Zfish   200 SFDCN-TDVHTVASLLKLYLRELPEPVIPFSKYEEFLACTKLLSKDQEAGMK-ELRRQVEALPVV 262

  Fly   372 NYANLRYLTRFLSIVQQRSALNKMSSQNLAIVMSPNMLWPRIDKSSNAPADYIGQVNSSSAANII 436
            ||..|:|:.:||..||..|.:||||.||||.|..||:|.|:::       |.:..:..:.....:
Zfish   263 NYNLLKYICKFLDEVQSYSGVNKMSVQNLATVFGPNILRPKVE-------DPVTIMEGTVLVQQL 320

  Fly   437 VELLISQWDYFFIGEVEFYLTLQKQKLFVEGKSKSNSSNENLDRNDSEVMESPRYGTLRRQKANA 501
            :.:||.|.|..|..|.|...||                 |.::.|::|..:.|..|.|:.::.| 
Zfish   321 MAVLIGQHDVLFPAEEEHSSTL-----------------ELVNNNNNETQKQPTNGQLQNKENN- 367

  Fly   502 PSPPTTNGNGIIMTTSQTSHRPHAKELFPQQTPEKQEKPAKPPLPNLPQFQSPAASQP----TQT 562
                           :.|..|        |.|.:..|.|.:.||.|    .||.:..|    |..
Zfish   368 ---------------NTTGAR--------QCTWDAPESPNRTPLDN----GSPRSGSPRNGFTGQ 405

  Fly   563 QLEPLPPPPV----TPA--KPVPMTRTQFFGLDNLPSPTADRKSTDSIGSFKLKPDVPQKPLLPK 621
            :.|....||:    .||  |...:.....|...:..|..|.:..|.::         |....|..
Zfish   406 KFEVTRSPPLAVKKNPAFSKGSGIVTNGSFSSSSSSSGDASQDKTQTL---------PNMGTLHA 461

  Fly   622 RPTVLGVGVPKADG-KSDDEGG--------TTPTQATIDNGNGSVRFKTEHFLDKLRQENGETNG 677
            |.|    |..|..| |...:.|        |..|..||:..||            |...||... 
Zfish   462 RRT----GAIKGSGTKMGVQNGVVRMGVSSTDVTNGTINARNG------------LWVPNGHVT- 509

  Fly   678 TREVSSTTKENNHNHDPPATAADQNQQQAQPQVTTP 713
            .|:..|...|:..|.    .:...|.|..|.|:|.|
Zfish   510 MRDGKSREPEHQQNR----LSTYDNVQIHQQQMTQP 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP92BNP_001287417.1 BAR 27..257 CDD:299863 4/7 (57%)
RhoGAP_nadrin 245..452 CDD:239851 67/209 (32%)
arhgap24XP_001339010.2 PH-like 21..134 CDD:302622
PH 23..127 CDD:278594
RhoGAP_ARHGAP22_24_25 134..332 CDD:239855 66/205 (32%)
BAR <649..737 CDD:299863
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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