DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4538 and MCX1

DIOPT Version :9

Sequence 1:NP_001287413.1 Gene:CG4538 / 42369 FlyBaseID:FBgn0038745 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_009786.1 Gene:MCX1 / 852528 SGDID:S000000431 Length:520 Species:Saccharomyces cerevisiae


Alignment Length:555 Identity:183/555 - (32%)
Similarity:266/555 - (47%) Gaps:112/555 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 VKCAKCNYFFVVLSEVETKQRTKDEPKNQRKPP--PPPQKIMEYLDKHVVGQDFAKKVLAVAVYN 219
            :|.|..|:|....|.:.....|......|.:..  |.|:.:.::||:::|||:..||||:|||||
Yeast     2 LKSASQNFFRAYSSRIGRYAATASGKLAQSRLSNIPTPKALKKFLDEYIVGQEIGKKVLSVAVYN 66

  Fly   220 HYKRIH--HNLPQLQNQGAGASNGAGGGLDGIPRPDLLHITGIGHTLNSSPGNELPPKSPTQMGM 282
            ||.||:  ....:||.|                 .:|:....|      :...:.|..|      
Yeast    67 HYLRINDKQKKGELQRQ-----------------RELMEREKI------ADDRDEPIFS------ 102

  Fly   283 GGGMGGPGLGAGLTGASSSNARGGGDNRSGSEILDRQ--------STDVKLEKSNIIMLGPTGSG 339
                                  |..::::|...|.||        ..|::|.|||::::||:|||
Yeast   103 ----------------------GNSESKAGWRNLQRQFNLAGREVDEDLELSKSNVLVVGPSGSG 145

  Fly   340 KTLIAQTIAKCLDVPFAICDCTTLTQAGYVGEDIESVISKLLQDANYNVERAQTGIVFLDEVDKI 404
            |||:|.|:||.|:||.||.|||.||||||:|||:|..|.:||.:|.::|.||:.||:.|||:||:
Yeast   146 KTLLATTLAKILNVPIAITDCTQLTQAGYIGEDVEVCIERLLVNAEFDVARAEKGIIVLDEIDKL 210

  Fly   405 GAVPGIHQLRDVGGEGVQQGMLKMLEGTVVNVP-----------ERNSPRKLRGETVQVDTTNIL 458
            .........:||.||||||.:||::||..|.:.           ::|.....:.|...|||:|||
Yeast   211 AKPAASIGTKDVSGEGVQQSLLKIIEGHKVEITVKRPVKHDIDGQKNQTTTKKDEVFVVDTSNIL 275

  Fly   459 FVASGAYTGLDRLIARRLNEKYLGFGMPSTSGSGRRAAQSAASPMDN------------DQEERD 511
            |:..||:.|||:.|.:|:.:      |.....:|.....|.:..::.            :|.|.|
Yeast   276 FMIMGAFVGLDKHIVKRIED------MKKIQKAGESVESSNSKEVEKERAKKFRFSNTLEQVELD 334

  Fly   512 K-----CLTKVQARDLVEFGMIPEFVGRFPVIVPFHSLNVSMLVRILTEPRNALVPQYKALLGLD 571
            .     .|......|||.||:|||.:||.|:|.....|....|..||.||:|||:.||:.:....
Yeast   335 NGKKVCALDLTTPTDLVSFGLIPELIGRVPIITALQPLQRDDLFHILKEPKNALLDQYEYIFKQF 399

  Fly   572 EVDLTFTEDAVKSIAQLAMERHTGARGLRSIMEQLLLDPMFIVPGSDIRGVHITADYVKGSATPE 636
            .|.|..|:.|:|.:||.|::..|||||||.|||:|||:..:..|||:|..|.|....|......|
Yeast   400 GVRLCVTQKALKKVAQFALKEGTGARGLRGIMERLLLNVNYDCPGSNIAYVLIDEATVDSLQETE 464

  Fly   637 YSRDADAAASGTVATDSDTTTDNDKNFENSEKSGL 671
            :|          :|:..|.     |.:...||..|
Yeast   465 HS----------LASQVDV-----KYYSGDEKDSL 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4538NP_001287413.1 ClpX 140..638 CDD:224140 176/520 (34%)
AAA_2 327..537 CDD:285025 93/237 (39%)
ClpB_D2-small 544..631 CDD:198154 39/86 (45%)
MCX1NP_009786.1 ClpX 1..478 CDD:224140 180/547 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346201
Domainoid 1 1.000 169 1.000 Domainoid score I786
eggNOG 1 0.900 - - E1_COG1219
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4851
Inparanoid 1 1.050 287 1.000 Inparanoid score I538
Isobase 1 0.950 - 0 Normalized mean entropy S1175
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002664
OrthoInspector 1 1.000 - - oto99297
orthoMCL 1 0.900 - - OOG6_101643
Panther 1 1.100 - - LDO PTHR48102
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2184
SonicParanoid 1 1.000 - - X1775
TreeFam 1 0.960 - -
1514.730

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