DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4538 and AT1G33360

DIOPT Version :9

Sequence 1:NP_001287413.1 Gene:CG4538 / 42369 FlyBaseID:FBgn0038745 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_564423.3 Gene:AT1G33360 / 840230 AraportID:AT1G33360 Length:656 Species:Arabidopsis thaliana


Alignment Length:640 Identity:207/640 - (32%)
Similarity:294/640 - (45%) Gaps:199/640 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 PEDSSESGSGSEGG-ASASGGSGAKSPGGAAGSGASSTSGADPPGGGSDKFLSCPKCGSACTQV- 147
            |:||..||:|.:.. .|.:.....|:..|....|.|...|.         |:...:..|..|.. 
plant    97 PDDSDSSGAGDKTNFQSVNFCPTCKTAYGFNPRGVSPLQGT---------FIEIGRVQSPTTTTT 152

  Fly   148 -ETFVSSTRFVKCAKCNYFFVVLSEVETKQRTKD------------------------EPKNQRK 187
             .|...|||                 :.:|.:||                        ||.....
plant   153 NATTSKSTR-----------------KQQQHSKDPNQGFNYRNKLRSSFWDTLRSYGAEPPEDWS 200

  Fly   188 PPPP-----------------------------------------------PQKIMEYLDKHVVG 205
            ||||                                               |::|.::|||.|:|
plant   201 PPPPHSPLNSSPPNTIPVNASPSAVDTSPLPDAVNDVSRWGGAGLGRDFPTPKEICKWLDKFVIG 265

  Fly   206 QDFAKKVLAVAVYNHYKRIHHNLPQLQNQGAGASNGAGGGLDGIPRPDLLHITGIGHTLNSSPGN 270
            |..|||||:||||||||||:|                                            
plant   266 QSRAKKVLSVAVYNHYKRIYH-------------------------------------------- 286

  Fly   271 ELPPKSPTQMGMGGGMGGPGLGAGLTGASSSNARGGGDNRSGSEILDRQSTDVKLEKSNIIMLGP 335
                   |.|..|                           |.::.:| ...:|:|:|||::::||
plant   287 -------TSMKKG---------------------------SAAQPID-DDDNVELDKSNVLLMGP 316

  Fly   336 TGSGKTLIAQTIAKCLDVPFAICDCTTLTQAGYVGEDIESVISKLLQDANYNVERAQTGIVFLDE 400
            |||||||:|:|:|:.::|||.|.|.||||||||||:|:||::.|||..|.:||:.||.|||::||
plant   317 TGSGKTLLAKTLARLVNVPFVIADATTLTQAGYVGDDVESILHKLLTVAEFNVQAAQQGIVYIDE 381

  Fly   401 VDKI-GAVPGIHQLRDVGGEGVQQGMLKMLEGTVVNVPERNSPRKLRGETVQVDTTNILFVASGA 464
            |||| .....::..|||.||||||.:||:||||:||||.:.:.:..||:.:|:||.:|||:..||
plant   382 VDKITKKAESLNISRDVSGEGVQQALLKLLEGTIVNVPGKGARKHPRGDHIQIDTKDILFICGGA 446

  Fly   465 YTGLDRLIARRLNEKYLGFGMP-----STSGSGRRAAQSAASPMDNDQEERDKCLTKVQARDLVE 524
            :..|::.|..|..:..:|||.|     :|||....|..|:             .|..|::.||..
plant   447 FVDLEKTIVDRRQDSSIGFGAPVRANMATSGVTSGAITSS-------------LLESVESADLTA 498

  Fly   525 FGMIPEFVGRFPVIVPFHSLNVSMLVRILTEPRNALVPQYKALLGLDEVDLTFTEDAVKSIAQLA 589
            :|:|||||||||::|...:|....|:|:|.||:|||..|||.|..::.|.|.|||.|::.|::.|
plant   499 YGLIPEFVGRFPILVSLSALTEDQLIRVLVEPKNALGKQYKKLFSMNNVKLHFTEKALEIISKQA 563

  Fly   590 MERHTGARGLRSIMEQLLLDPMFIVPGSDIRGVHITADYV-KGSATPEYSRDADA 643
            |.::|||||||:::|.:|.:.||.:|........|.|..| :.|.:.|.||...|
plant   564 MVKNTGARGLRALLESILTEAMFEIPDDKKGDERIDAVIVDEESTSSEASRGCTA 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4538NP_001287413.1 ClpX 140..638 CDD:224140 191/577 (33%)
AAA_2 327..537 CDD:285025 104/215 (48%)
ClpB_D2-small 544..631 CDD:198154 37/87 (43%)
AT1G33360NP_564423.3 clpX 247..606 CDD:235422 174/450 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 214 1.000 Domainoid score I763
eggNOG 1 0.900 - - E1_COG1219
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 338 1.000 Inparanoid score I651
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1040247at2759
OrthoFinder 1 1.000 - - FOG0002664
OrthoInspector 1 1.000 - - otm3124
orthoMCL 1 0.900 - - OOG6_101643
Panther 1 1.100 - - LDO PTHR48102
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1775
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.830

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