DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4538 and AT5G49840

DIOPT Version :9

Sequence 1:NP_001287413.1 Gene:CG4538 / 42369 FlyBaseID:FBgn0038745 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_001332696.1 Gene:AT5G49840 / 835047 AraportID:AT5G49840 Length:608 Species:Arabidopsis thaliana


Alignment Length:630 Identity:208/630 - (33%)
Similarity:297/630 - (47%) Gaps:213/630 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 SASGGSGAKSPGGAAGSGASSTSGADPPGGGSDKF------LSCPKCGSACTQVETFVS------ 152
            |.|||.|                     |||.|.:      ::||:|.:   |:....|      
plant    61 SCSGGGG---------------------GGGGDDYDHIRSDVNCPRCSA---QMHVIFSNRPLSL 101

  Fly   153 ---------STRFVKCAKCN---YF-----------FVVLSEVE-TKQRTKDEPKNQRKPP---- 189
                     :..|  |::|.   ||           |:.|.:|: |.....|:..:|:..|    
plant   102 TAREPGIYQAVNF--CSQCKTAFYFRPFKLSPLQGSFIELGKVKGTDDDHDDDDDDQKSFPRNWK 164

  Fly   190 ---------------------------------PPPQKIMEYLDKHVVGQDFAKKVLAVAVYNHY 221
                                             |.|::|.:.||:.|:||:.|||||:|||||||
plant   165 IQGLRSDEDGEDADEEEDESNGGDKEKQSVIKLPTPKEICQGLDEFVIGQEKAKKVLSVAVYNHY 229

  Fly   222 KRIHHNLPQLQNQGAGASNGAGGGLDGIPRPDLLHITGIGHTLNSSPGNELPPKSPTQMGMGGGM 286
            |||:|                                                            
plant   230 KRIYH------------------------------------------------------------ 234

  Fly   287 GGPGLGAGLTGASSSNARGGGDNRSGSEILDRQSTDVKLEKSNIIMLGPTGSGKTLIAQTIAKCL 351
                         :|..:|........::.|.....|:|:|||:::||||||||||:|:|:|:.:
plant   235 -------------ASRKKGSASESYNIDMEDDNIDHVELDKSNVLLLGPTGSGKTLLAKTLARIV 286

  Fly   352 DVPFAICDCTTLTQAGYVGEDIESVISKLLQDANYNVERAQTGIVFLDEVDKI--------GAVP 408
            :|||||.|.|:||||||||||:||::.||..:|..|||.||.|||::|||||:        |.  
plant   287 NVPFAIADATSLTQAGYVGEDVESILYKLYVEAGCNVEEAQRGIVYIDEVDKMTMKSHSSNGG-- 349

  Fly   409 GIHQLRDVGGEGVQQGMLKMLEGTVVNV--PERNSPRKLRGETVQVDTTNILFVASGAYTGLDRL 471
                 |||.||||||.:||:||||||:|  ||:...|..||:::|:||.:|||:..||:..|::.
plant   350 -----RDVSGEGVQQSLLKLLEGTVVSVPIPEKGLRRDPRGDSIQMDTKDILFICGGAFIDLEKT 409

  Fly   472 IARRLNEKYLGFGMP-----STSGSGRRAAQSAASPMDNDQEERDKCLTKVQARDLVEFGMIPEF 531
            ::.|.::..:|||..     ||||....|..|:             .|..:|:.|||.:|:||||
plant   410 VSERQHDASIGFGASVRTNMSTSGLSSAAVTSS-------------LLESLQSEDLVAYGLIPEF 461

  Fly   532 VGRFPVIVPFHSLNVSMLVRILTEPRNALVPQYKALLGLDEVDLTFTEDAVKSIAQLAMERHTGA 596
            |||.|::|...:||...||::||||::||..|||.|..::.|.|.|||.|.:.||:.||.::|||
plant   462 VGRLPILVSLSALNEDQLVQVLTEPKSALGKQYKKLFRMNNVQLQFTEGATRLIARKAMSKNTGA 526

  Fly   597 RGLRSIMEQLLLDPMFIVPGS------DIRGVHITADYVKGSATP 635
            ||||||:|.:|.:.||.||.|      .|:.|.:..:.|....:|
plant   527 RGLRSILESILTEAMFEVPDSITEGSQSIKAVLVDEEAVGSVGSP 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4538NP_001287413.1 ClpX 140..638 CDD:224140 197/584 (34%)
AAA_2 327..537 CDD:285025 107/224 (48%)
ClpB_D2-small 544..631 CDD:198154 43/92 (47%)
AT5G49840NP_001332696.1 clpX 189..565 CDD:235422 180/468 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 214 1.000 Domainoid score I763
eggNOG 1 0.900 - - E1_COG1219
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 338 1.000 Inparanoid score I651
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1040247at2759
OrthoFinder 1 1.000 - - FOG0002664
OrthoInspector 1 1.000 - - otm3124
orthoMCL 1 0.900 - - OOG6_101643
Panther 1 1.100 - - O PTHR48102
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1775
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.830

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