DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4538 and clpx

DIOPT Version :9

Sequence 1:NP_001287413.1 Gene:CG4538 / 42369 FlyBaseID:FBgn0038745 Length:679 Species:Drosophila melanogaster
Sequence 2:XP_012814634.1 Gene:clpx / 733875 XenbaseID:XB-GENE-991453 Length:624 Species:Xenopus tropicalis


Alignment Length:647 Identity:350/647 - (54%)
Similarity:426/647 - (65%) Gaps:106/647 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 CARNRLMRLEPAMAIPAYI---------DVTNAHSRTPEDSSESGSGSEGGASASGGSGAKSPGG 112
            |:|.||..|:...:...|:         .||..:..: :|:.:.||| :|...:.|..|:|...|
 Frog    23 CSRGRLSLLKRQRSSEFYLTWKVPFRRFTVTTVYYAS-KDAGKDGSG-DGNKKSVGDGGSKKSSG 85

  Fly   113 AAGSGASSTSGADPPGGGSDKFLSCPKCGSACTQVETFVSSTRFVKCAKCNYFFVVLSEVETKQR 177
            .:|.|.:.              |.|||||..||.|||||||||||||.||::|||||||.::|:.
 Frog    86 GSGKGGNQ--------------LRCPKCGDLCTHVETFVSSTRFVKCEKCHHFFVVLSEADSKKT 136

  Fly   178 TKDEPKN---------QRKPPPPPQKIMEYLDKHVVGQDFAKKVLAVAVYNHYKRIHHNLPQLQN 233
            ...||:.         |:||||||:||..||||:||||.||||||:||||||||||::|:|....
 Frog   137 MSKEPETAAEAVKLAFQQKPPPPPKKIYNYLDKYVVGQSFAKKVLSVAVYNHYKRIYNNIPTNLR 201

  Fly   234 QGAGASNGAG---GGLDGIPRPD------LLHITGI---GHTLNSSPGNELPPKSPTQMGMGGGM 286
            |.|.....|.   ..|:...|.|      ||.|.||   |:.|.:|...::..:.|.:       
 Frog   202 QQAEVEKQASLTPRELEIRRREDEYRFTKLLQIAGISPHGNALGASMQQQVNQQMPQE------- 259

  Fly   287 GGPGLGAGLTGASSSNARGGGDNRSGSEILDRQSTDVKLEKSNIIMLGPTGSGKTLIAQTIAKCL 351
                                   |.|.|:||..:.::|||||||::||||||||||:|||:||||
 Frog   260 -----------------------RRGGEVLDSNNDEIKLEKSNILLLGPTGSGKTLLAQTLAKCL 301

  Fly   352 DVPFAICDCTTLTQAGYVGEDIESVISKLLQDANYNVERAQTGIVFLDEVDKIGAVPGIHQLRDV 416
            ||||||||||||||||||||||||||:|||||||||||:||.||||||||||||:||||||||||
 Frog   302 DVPFAICDCTTLTQAGYVGEDIESVIAKLLQDANYNVEKAQQGIVFLDEVDKIGSVPGIHQLRDV 366

  Fly   417 GGEGVQQGMLKMLEGTVVNVPERNSPRKLRGETVQVDTTNILFVASGAYTGLDRLIARRLNEKYL 481
            ||||||||:||:||||:|||||:|| ||||||||||||||||||||||:.||||:|:||.|||||
 Frog   367 GGEGVQQGLLKLLEGTIVNVPEKNS-RKLRGETVQVDTTNILFVASGAFNGLDRIISRRKNEKYL 430

  Fly   482 GFGMPSTSGSGRRAAQSA----ASPMDN---DQEERDKCLTKVQARDLVEFGMIPEFVGRFPVIV 539
            |||:.|..|.|||||.:|    ||...|   |.||:|:.|..|:||||:|||||||||||.||:|
 Frog   431 GFGIASNLGKGRRAAAAADLANASSESNVVQDIEEKDRLLRLVEARDLIEFGMIPEFVGRLPVVV 495

  Fly   540 PFHSLNVSMLVRILTEPRNALVPQYKALLGLDEVDLTFTEDAVKSIAQLAMERHTGARGLRSIME 604
            |.|||:...|||||||||||:||||:||..:|:.:|:..|||:::||:||:||.|||||||||||
 Frog   496 PLHSLDEQTLVRILTEPRNAVVPQYQALFSMDKCELSINEDALRAIARLALERKTGARGLRSIME 560

  Fly   605 QLLLDPMFIVPGSDIRGVHITADYVKGSATPEY----------------------SRDADAA 644
            :|||:|||.||.|||..|.:..:.|:|...|.|                      ||.||||
 Frog   561 KLLLEPMFEVPNSDIVCVEVDQEVVEGKKDPRYVKTQRKEVTEEEYDSGVEEEGWSRQADAA 622

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4538NP_001287413.1 ClpX 140..638 CDD:224140 321/547 (59%)
AAA_2 327..537 CDD:285025 172/216 (80%)
ClpB_D2-small 544..631 CDD:198154 53/86 (62%)
clpxXP_012814634.1 Zn-ribbon 95..123 CDD:383047 22/27 (81%)
clpX 163..599 CDD:235422 284/466 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 341 1.000 Domainoid score I1083
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 613 1.000 Inparanoid score I895
OMA 1 1.010 - - QHG49224
OrthoDB 1 1.010 - - D1040247at2759
OrthoFinder 1 1.000 - - FOG0002664
OrthoInspector 1 1.000 - - oto103056
Panther 1 1.100 - - LDO PTHR48102
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2184
SonicParanoid 1 1.000 - - X1775
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.110

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