DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4538 and Clpx

DIOPT Version :9

Sequence 1:NP_001287413.1 Gene:CG4538 / 42369 FlyBaseID:FBgn0038745 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_035932.2 Gene:Clpx / 270166 MGIID:1346017 Length:634 Species:Mus musculus


Alignment Length:666 Identity:355/666 - (53%)
Similarity:431/666 - (64%) Gaps:91/666 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 SARCVILSAGSAENS-DCGVRRFHL-------ATRNCARNRLMRLEPAMAIPAYIDVTNAHSRTP 85
            :||.:..|..||:.. .||  |.|:       .|.:....|...|......|||.       .:.
Mouse    13 AARLLTTSLTSAQRGISCG--RIHVPVLGRLGTTLDAQALRRAPLRTFSETPAYF-------ASK 68

  Fly    86 EDSSESGSGSEGGASASGGSGAKSPGGAAGSGASSTSGADPPGGGSDKFLSCPKCGSACTQVETF 150
            :.:::.|||.....|.:.||..||..|.:|.|.:.              |.|||||..||.||||
Mouse    69 DGANKDGSGDGNKKSVTEGSSKKSGSGNSGKGGNQ--------------LRCPKCGDLCTHVETF 119

  Fly   151 VSSTRFVKCAKCNYFFVVLSEVETKQRTKDEPKN---------QRKPPPPPQKIMEYLDKHVVGQ 206
            |||||||||.||::|||||||.::|:....||::         |:||||||:||..||||:||||
Mouse   120 VSSTRFVKCEKCHHFFVVLSEADSKKSIIKEPESAAEAVKLAFQQKPPPPPKKIYNYLDKYVVGQ 184

  Fly   207 DFAKKVLAVAVYNHYKRIHHNLPQLQNQGAGASNGAG---GGLDGIPRPD------LLHITGI-- 260
            .||||||:||||||||||::|:|....|.|.|.....   ..|:...|.|      ||.|.||  
Mouse   185 SFAKKVLSVAVYNHYKRIYNNIPANLRQQAEAEKQTSLTPRELEIRRREDEYRFTKLLQIAGISP 249

  Fly   261 -GHTLNSSPGNELPPKSPTQMGMGGGMGGPGLGAGLTGASSSNARGGGDNRSGSEILDRQSTDVK 324
             |:.|.:|...::..:.|.:                              :.|.|:||....|:|
Mouse   250 HGNALGASMQQQVNQQMPQE------------------------------KRGGEVLDSSQDDIK 284

  Fly   325 LEKSNIIMLGPTGSGKTLIAQTIAKCLDVPFAICDCTTLTQAGYVGEDIESVISKLLQDANYNVE 389
            ||||||::||||||||||:|||:||||||||||||||||||||||||||||||:|||||||||||
Mouse   285 LEKSNILLLGPTGSGKTLLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIESVIAKLLQDANYNVE 349

  Fly   390 RAQTGIVFLDEVDKIGAVPGIHQLRDVGGEGVQQGMLKMLEGTVVNVPERNSPRKLRGETVQVDT 454
            :||.||||||||||||:||||||||||||||||||:||:||||:|||||:|| ||||||||||||
Mouse   350 KAQQGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKLLEGTIVNVPEKNS-RKLRGETVQVDT 413

  Fly   455 TNILFVASGAYTGLDRLIARRLNEKYLGFGMPSTSGSGRRAA-------QSAASPMDNDQEERDK 512
            ||:|||||||:.||||:|:||.||||||||.||..|.|||||       :|..|....|.||:|:
Mouse   414 TNVLFVASGAFNGLDRIISRRKNEKYLGFGTPSNLGKGRRAAAAADLANRSGESNTHQDIEEKDR 478

  Fly   513 CLTKVQARDLVEFGMIPEFVGRFPVIVPFHSLNVSMLVRILTEPRNALVPQYKALLGLDEVDLTF 577
            .|..|:||||:|||||||||||.||:||.|||:...||:||||||||::|||:||..:|:.:|..
Mouse   479 LLRHVEARDLIEFGMIPEFVGRLPVVVPLHSLDEKTLVQILTEPRNAVIPQYQALFSMDKCELNV 543

  Fly   578 TEDAVKSIAQLAMERHTGARGLRSIMEQLLLDPMFIVPGSDIRGVHITADYVKGSATPEYSRDAD 642
            ||||:|:||:||:||.|||||||||||:|||:|||.||.|||..|.:..:.|:|...|.|.| |.
Mouse   544 TEDALKAIARLALERKTGARGLRSIMEKLLLEPMFEVPNSDIVCVEVDKEVVEGKKEPGYIR-AP 607

  Fly   643 AAASGTVATDSDTTTD 658
            :..|.....||....|
Mouse   608 SKESSEEEYDSGVEED 623

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4538NP_001287413.1 ClpX 140..638 CDD:224140 318/525 (61%)
AAA_2 327..537 CDD:285025 170/216 (79%)
ClpB_D2-small 544..631 CDD:198154 53/86 (62%)
ClpxNP_035932.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 69..102 11/32 (34%)
clpX 103..601 CDD:273047 321/542 (59%)
Zn-ribbon 105..133 CDD:295390 22/27 (81%)
AAA_2 287..503 CDD:285025 170/216 (79%)
ClpB_D2-small 510..604 CDD:198154 55/93 (59%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 599..634 8/26 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849395
Domainoid 1 1.000 343 1.000 Domainoid score I1066
eggNOG 1 0.900 - - E1_COG1219
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4851
Inparanoid 1 1.050 615 1.000 Inparanoid score I893
Isobase 1 0.950 - 0 Normalized mean entropy S1175
OMA 1 1.010 - - QHG49224
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002664
OrthoInspector 1 1.000 - - oto92784
orthoMCL 1 0.900 - - OOG6_101643
Panther 1 1.100 - - LDO PTHR48102
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1775
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.710

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