DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4538 and D2030.2

DIOPT Version :9

Sequence 1:NP_001287413.1 Gene:CG4538 / 42369 FlyBaseID:FBgn0038745 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_001021076.1 Gene:D2030.2 / 172511 WormBaseID:WBGene00008412 Length:586 Species:Caenorhabditis elegans


Alignment Length:588 Identity:245/588 - (41%)
Similarity:331/588 - (56%) Gaps:93/588 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 SSESGSGSEGGASASGGSGAKSPGGAAGSGASSTSGADPPGGGSDKFLSCPKCGSACTQVETFVS 152
            ||.|.||.:.|  ..||:..::.||...:.        ||......|..|..|......:.|...
 Worm    36 SSSSSSGGDNG--NDGGNNGENGGGDLTNA--------PPNKAVQSFGQCRHCSKPLKPLPTLTP 90

  Fly   153 STRFVKCAKC------NYFFVVLSEVETKQRTKDEPKN-------QRKPPPPPQKIMEYLDKHVV 204
            |.|::.|..|      |||             :|..||       .||.||.|.:|.|||||.||
 Worm    91 SNRYIHCDSCNKLYFANYF-------------EDSAKNGMFSKQFARKTPPYPTQIAEYLDKFVV 142

  Fly   205 GQDFAKKVLAVAVYNHYKRIHHNL-----------PQLQNQGAGASNGAGGGLD-----GIPRPD 253
            ||..|||.|||.||.||:|:.||:           .|..:.|...||   .|:|     |:...|
 Worm   143 GQKKAKKTLAVGVYQHYRRLEHNIETGASSIYQTHAQTSSSGKSLSN---DGMDPKMPRGVFYQD 204

  Fly   254 LLHI-----TGIGHTLNSSPGNELPPKSPTQMGMGGGMGGPGLGAGLTGASSSNARGGGDNRSGS 313
            .|.:     :.:.:::.....|..|| ||.|                   |..||      ....
 Worm   205 ELRLGQMASSELRNSIMQQQSNNQPP-SPAQ-------------------SPRNA------APTF 243

  Fly   314 EILDRQSTDVKLEKSNIIMLGPTGSGKTLIAQTIAKCLDVPFAICDCTTLTQAGYVGEDIESVIS 378
            ..|..:...|:|||||::::||:|.|||.:.||:|:.||||.|:||||::|||||||||:||||.
 Worm   244 RALPEKEQSVRLEKSNVLLVGPSGVGKTFLTQTLARVLDVPIALCDCTSMTQAGYVGEDVESVIQ 308

  Fly   379 KLLQDANYNVERAQTGIVFLDEVDKIGAVPGIHQ--LRDVGGEGVQQGMLKMLEGTVVNVPERNS 441
            ||:|.|..|||:||.|||||||||||.|....|.  .|||.|||||..:||::|||||||.....
 Worm   309 KLVQAAGGNVEKAQQGIVFLDEVDKIAAAHEGHSAAYRDVSGEGVQHALLKLVEGTVVNVKSGKK 373

  Fly   442 PRKLRGETVQVDTTNILFVASGAYTGLDRLIARRLNEKYLGFGMPSTSGSGRRAAQSAASPMDND 506
            ....:.:.||:|||:|||:||||::.||:::.|||::|.||||  ::||:.|.:...:.|.:   
 Worm   374 GMGSQQDQVQIDTTDILFIASGAFSNLDKIVGRRLDKKALGFG--TSSGNVRISGDDSNSEV--- 433

  Fly   507 QEERDKCLTKVQARDLVEFGMIPEFVGRFPVIVPFHSLNVSMLVRILTEPRNALVPQYKALLGLD 571
            ..:||:.|:|....||:.|||:||.||||||:|||||.:..||||::|||:|:|:.|.|...|:|
 Worm   434 MRKRDELLSKADQGDLISFGMVPELVGRFPVLVPFHSFDKQMLVRVMTEPQNSLLAQLKLQFGID 498

  Fly   572 EVDLTFTEDAVKSIAQLAMERHTGARGLRSIMEQLLLDPMFIVPGSDIRGVHITADYVKGSATPE 636
            .|||:|:.:|::.:||||::|.||||.||||:|..||:..|.||||||..||::.:.:.|....|
 Worm   499 NVDLSFSAEALEQVAQLALDRKTGARALRSILEAALLEAKFTVPGSDIESVHVSREAILGEKEVE 563

  Fly   637 YSR 639
            |||
 Worm   564 YSR 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4538NP_001287413.1 ClpX 140..638 CDD:224140 228/533 (43%)
AAA_2 327..537 CDD:285025 114/211 (54%)
ClpB_D2-small 544..631 CDD:198154 43/86 (50%)
D2030.2NP_001021076.1 clpX 94..570 CDD:235422 227/520 (44%)
AAA_2 257..464 CDD:285025 114/211 (54%)
ClpB_D2-small 472..555 CDD:198154 43/82 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166564
Domainoid 1 1.000 228 1.000 Domainoid score I1416
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4851
Inparanoid 1 1.050 408 1.000 Inparanoid score I1059
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG49224
OrthoDB 1 1.010 - - D1040247at2759
OrthoFinder 1 1.000 - - FOG0002664
OrthoInspector 1 1.000 - - oto17811
orthoMCL 1 0.900 - - OOG6_101643
Panther 1 1.100 - - LDO PTHR48102
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2184
SonicParanoid 1 1.000 - - X1775
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1413.940

Return to query results.
Submit another query.