DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4538 and K07A3.3

DIOPT Version :9

Sequence 1:NP_001287413.1 Gene:CG4538 / 42369 FlyBaseID:FBgn0038745 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_001021562.1 Gene:K07A3.3 / 171817 WormBaseID:WBGene00019461 Length:518 Species:Caenorhabditis elegans


Alignment Length:464 Identity:178/464 - (38%)
Similarity:278/464 - (59%) Gaps:64/464 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 KDEPKNQRKPPPPPQKIMEYLDKHVVGQDFAKKVLAVAVYNHYKRIHHNL----PQLQNQGAGAS 239
            :|..::::|....|::|:|:|:|:||||:.|||.||||||.||:|:.:||    ..:.::...|:
 Worm    88 RDGGRDEKKLILHPKEIVEHLNKYVVGQEEAKKYLAVAVYQHYRRVENNLRVTEQWMLSEAVAAA 152

  Fly   240 NGAGGGLDGIPRPDLLHITGIGHTLNSSPGNELPPKSPTQMGMGGGMGGPGLGAGLTGASSSNAR 304
            ..........|..:..:             .|...||..|:                        
 Worm   153 KERKKMRKQNPEEEEYY-------------PEYVQKSQRQI------------------------ 180

  Fly   305 GGGDNRSGSEILDRQSTDVKLEKSNIIMLGPTGSGKTLIAQTIAKCLDVPFAICDCTTLTQAGYV 369
                   ..::..||  |:.|:|||:|:||.:|:|||.:.|.:|:.||||..|||||||||||||
 Worm   181 -------LKDLEKRQ--DMILDKSNMILLGASGTGKTFMTQKLAEVLDVPIVICDCTTLTQAGYV 236

  Fly   370 GEDIESVISKLLQDANYNVERAQTGIVFLDEVDKI--GAVPGIHQL--RDVGGEGVQQGMLKMLE 430
            |:|:::||.|||.:|..::|:.|.|||||||.|||  .:.| :|..  |||.|:||||.:||::|
 Worm   237 GDDVDTVIQKLLAEAMGDIEKCQRGIVFLDEFDKIYTSSDP-LHTSGNRDVSGKGVQQALLKLVE 300

  Fly   431 GTVVNVPERNSPRKLRGETVQVDTTNILFVASGAYTGLDRLIARRLNEKYLGFGMPSTSGSGRRA 495
            |::|.|.:..:|    ...|.:||:||||:||||::.::.::|||::::.||| :.:||......
 Worm   301 GSLVKVRDPLAP----NSKVTIDTSNILFIASGAFSNIEHIVARRMDKRSLGF-LSATSPHKLGD 360

  Fly   496 AQSAASPMDNDQE----ERDKCLTKVQARDLVEFGMIPEFVGRFPVIVPFHSLNVSMLVRILTEP 556
            ..:.....|:|:|    .|::.:.:....||:.||||||.|||||||||||.|:.:.|:.:||||
 Worm   361 QDTTEKLRDSDEEIVSKARNEMIKQCDQGDLISFGMIPELVGRFPVIVPFHCLDKTHLMSVLTEP 425

  Fly   557 RNALVPQYKALLGLDEVDLTFTEDAVKSIAQLAMERHTGARGLRSIMEQLLLDPMFIVPGSDIRG 621
            |.:|:.|.|.....:.|:|.|:..|:::||::|::|.||||.|:||:|:.:::..:.|||||::.
 Worm   426 RGSLIAQTKKFFENENVELRFSPAAIEAIAEMAVKRKTGARALKSIVEKAVMNAKYEVPGSDVKC 490

  Fly   622 VHITADYVK 630
            |.||...:|
 Worm   491 VEITDQNLK 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4538NP_001287413.1 ClpX 140..638 CDD:224140 178/464 (38%)
AAA_2 327..537 CDD:285025 101/217 (47%)
ClpB_D2-small 544..631 CDD:198154 35/87 (40%)
K07A3.3NP_001021562.1 HslU 99..510 CDD:224141 176/453 (39%)
AAA_2 194..406 CDD:285025 101/217 (47%)
ClpB_D2-small 413..497 CDD:198154 34/83 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG49224
OrthoDB 1 1.010 - - D1040247at2759
OrthoFinder 1 1.000 - - FOG0002664
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101643
Panther 1 1.100 - - O PTHR48102
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1775
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.930

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