DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ClpX and CLPX

DIOPT Version :10

Sequence 1:NP_001287413.1 Gene:ClpX / 42369 FlyBaseID:FBgn0038745 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_006651.2 Gene:CLPX / 10845 HGNCID:2088 Length:633 Species:Homo sapiens


Alignment Length:679 Identity:358/679 - (52%)
Similarity:432/679 - (63%) Gaps:111/679 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 THGSA--RCVILSAGSAENSDCGVRRFH---LATRNCARNRLMRLEPAMAI---PAYIDVTNAHS 82
            |.|:|  |.:..|..||:....| .|.|   |........::::..|..:.   |||.       
Human     8 TCGAAAVRLITSSLASAQRGISG-GRIHMSVLGRLGTFETQILQRAPLRSFTETPAYF------- 64

  Fly    83 RTPEDSSESGSGSEGGASASGGSGAKSPGGAAGSGASSTSGADPPGGGSDKFLSCPKCGSACTQV 147
            .:.:..|:.|||.....|||.||..||..|.:|.|.:.              |.|||||..||.|
Human    65 ASKDGISKDGSGDGNKKSASEGSSKKSGSGNSGKGGNQ--------------LRCPKCGDLCTHV 115

  Fly   148 ETFVSSTRFVKCAKCNYFFVVLSEVETKQRTKDEPKN---------QRKPPPPPQKIMEYLDKHV 203
            ||||||||||||.||::|||||||.::|:....||::         |:||||||:||..||||:|
Human   116 ETFVSSTRFVKCEKCHHFFVVLSEADSKKSIIKEPESAAEAVKLAFQQKPPPPPKKIYNYLDKYV 180

  Fly   204 VGQDFAKKVLAVAVYNHYKRIHHNLPQLQNQGAGASNGAG---GGLDGIPRPD------LLHITG 259
            |||.||||||:||||||||||::|:|....|.|.......   ..|:...|.|      ||.|.|
Human   181 VGQSFAKKVLSVAVYNHYKRIYNNIPANLRQQAEVEKQTSLTPRELEIRRREDEYRFTKLLQIAG 245

  Fly   260 I---GHTLNSSPGNELPPKSPTQMGMGGGMGGPGLGAGLTGASSSNARGGGDNRSGSEILDRQST 321
            |   |:.|.:|...::..:.|.:                              :.|.|:||....
Human   246 ISPHGNALGASMQQQVNQQIPQE------------------------------KRGGEVLDSSHD 280

  Fly   322 DVKLEKSNIIMLGPTGSGKTLIAQTIAKCLDVPFAICDCTTLTQAGYVGEDIESVISKLLQDANY 386
            |:|||||||::||||||||||:|||:||||||||||||||||||||||||||||||:||||||||
Human   281 DIKLEKSNILLLGPTGSGKTLLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIESVIAKLLQDANY 345

  Fly   387 NVERAQTGIVFLDEVDKIGAVPGIHQLRDVGGEGVQQGMLKMLEGTVVNVPERNSPRKLRGETVQ 451
            |||:||.||||||||||||:||||||||||||||||||:||:||||:|||||:|| |||||||||
Human   346 NVEKAQQGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKLLEGTIVNVPEKNS-RKLRGETVQ 409

  Fly   452 VDTTNILFVASGAYTGLDRLIARRLNEKYLGFGMPSTSGSGRRAA-------QSAASPMDNDQEE 509
            |||||||||||||:.||||:|:||.||||||||.||..|.|||||       :|..|....|.||
Human   410 VDTTNILFVASGAFNGLDRIISRRKNEKYLGFGTPSNLGKGRRAAAAADLANRSGESNTHQDIEE 474

  Fly   510 RDKCLTKVQARDLVEFGMIPEFVGRFPVIVPFHSLNVSMLVRILTEPRNALVPQYKALLGLDEVD 574
            :|:.|..|:||||:|||||||||||.||:||.|||:...||:||||||||::|||:||..:|:.:
Human   475 KDRLLRHVEARDLIEFGMIPEFVGRLPVVVPLHSLDEKTLVQILTEPRNAVIPQYQALFSMDKCE 539

  Fly   575 LTFTEDAVKSIAQLAMERHTGARGLRSIMEQLLLDPMFIVPGSDIRGVHITADYVKGSATPEY-- 637
            |..||||:|:||:||:||.|||||||||||:|||:|||.||.|||..|.:..:.|:|...|.|  
Human   540 LNVTEDALKAIARLALERKTGARGLRSIMEKLLLEPMFEVPNSDIVCVEVDKEVVEGKKEPGYIR 604

  Fly   638 --------------------SRDADAAAS 646
                                .|.||||.|
Human   605 APTKESSEEEYDSGVEEEGWPRQADAANS 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClpXNP_001287413.1 ClpX 129..637 CDD:440832 322/535 (60%)
CLPXNP_006651.2 Zn-ribbon 104..132 CDD:445850 22/27 (81%)
ClpX 172..605 CDD:440832 282/463 (61%)

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