Sequence 1: | NP_524407.1 | Gene: | ninaE / 42367 | FlyBaseID: | FBgn0002940 | Length: | 373 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_446000.1 | Gene: | Opn1mw / 89810 | RGDID: | 620978 | Length: | 359 | Species: | Rattus norvegicus |
Alignment Length: | 336 | Identity: | 101/336 - (30%) |
---|---|---|---|
Similarity: | 156/336 - (46%) | Gaps: | 35/336 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 47 PIWAKILTA-YMIMIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITNTPMMGIN 110
Fly 111 LYFETWVLGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAGRPMTIPLALGKIAYIWF 175
Fly 176 MSSIWCLAPAFGWSRYVPEGNLTSCGIDYLERDWNP--RSYLIFYSIFVYYIPLFLI--CY-SYW 235
Fly 236 FIIAAVSAHEKAMREQAKKMNVKSLRSSEDAEKSAEGKLAKVALVTITLWFMAWTPYLVINCMGL 300
Fly 301 ----FKFEGLTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCPCCVFG-KVDDGKSSDA 360
Fly 361 QSQATASEAES 371 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ninaE | NP_524407.1 | 7tmA_photoreceptors_insect | 52..340 | CDD:320207 | 89/297 (30%) |
TM helix 1 | 53..77 | CDD:320207 | 8/24 (33%) | ||
TM helix 2 | 86..108 | CDD:320207 | 6/21 (29%) | ||
TM helix 3 | 124..146 | CDD:320207 | 6/21 (29%) | ||
TM helix 4 | 168..184 | CDD:320207 | 3/15 (20%) | ||
TM helix 5 | 212..235 | CDD:320207 | 7/25 (28%) | ||
TM helix 6 | 275..297 | CDD:320207 | 4/21 (19%) | ||
TM helix 7 | 308..333 | CDD:320207 | 12/24 (50%) | ||
Opn1mw | NP_446000.1 | Required for 11-cis-retinal regeneration. /evidence=ECO:0000250|UniProtKB:P04001 | 12..38 | ||
7tm_1 | 66..317 | CDD:278431 | 82/269 (30%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X120 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |