DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaE and GALR3

DIOPT Version :10

Sequence 1:NP_524407.1 Gene:ninaE / 42367 FlyBaseID:FBgn0002940 Length:373 Species:Drosophila melanogaster
Sequence 2:NP_003605.1 Gene:GALR3 / 8484 HGNCID:4134 Length:368 Species:Homo sapiens


Alignment Length:316 Identity:67/316 - (21%)
Similarity:132/316 - (41%) Gaps:50/316 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 ILTAYMIMIGMISWCGNGVVIYIF-----ATTKSLRTPANLLVINLAISDFGIMITNTPMMGINL 111
            ::.|.:.::|.:   |||:|:.:.     :..:...:..:|.::|||::|...::...|......
Human    22 VVFALIFLLGTV---GNGLVLAVLLQPGPSAWQEPGSTTDLFILNLAVADLCFILCCVPFQATIY 83

  Fly   112 YFETWVLGPMMCD-----IYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAGRPMTIPL-ALGKI 170
            ..:.|:.|.::|.     ||..:     .:|.:::..:|:|||..:...:..|.:..|. |...:
Human    84 TLDAWLFGALVCKAVHLLIYLTM-----YASSFTLAAVSVDRYLAVRHPLRSRALRTPRNARAAV 143

  Fly   171 AYIWFMSSIWCLAPAFGWSRYVPEGNLTSCGIDYLERDW-NPRSYLIFYSIFV--YYIPLFLICY 232
            ..:|.:::::. ||...:...|..|.|..|     ...| :.|...:..:.|.  |.:|:.::..
Human   144 GLVWLLAALFS-APYLSYYGTVRYGALELC-----VPAWEDARRRALDVATFAAGYLLPVAVVSL 202

  Fly   233 SYW----FIIAAVSAHEKAMREQAKKMNVKSLRSSEDAEKSAEGKLAKVALVTITLWFMAWTP-Y 292
            :|.    |:.|||.....|..|               |.:.|.|:..:..|....|:.:.|.| :
Human   203 AYGRTLRFLWAAVGPAGAAAAE---------------ARRRATGRAGRAMLAVAALYALCWGPHH 252

  Fly   293 LVINCM--GLFKFEGLTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCPC 346
            .:|.|.  |.|.|...|....:...|.|.:.:|.||:||.::...:|...:...||
Human   253 ALILCFWYGRFAFSPATYACRLASHCLAYANSCLNPLVYALASRHFRARFRRLWPC 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaENP_524407.1 7tmA_photoreceptors_insect 52..340 CDD:320207 65/308 (21%)
TM helix 1 52..78 CDD:320207 6/30 (20%)
TM helix 2 85..111 CDD:320207 6/25 (24%)
TM helix 3 123..153 CDD:320207 8/34 (24%)
TM helix 4 164..184 CDD:320207 3/20 (15%)
TM helix 5 211..240 CDD:320207 6/34 (18%)
TM helix 6 269..299 CDD:320207 8/32 (25%)
TM helix 7 308..333 CDD:320207 7/24 (29%)
GALR3NP_003605.1 7tmA_Gal2_Gal3_R 18..302 CDD:320225 65/308 (21%)
TM helix 1 19..45 CDD:320225 6/25 (24%)
TM helix 2 57..83 CDD:320225 6/25 (24%)
TM helix 3 95..125 CDD:320225 8/34 (24%)
TM helix 4 137..157 CDD:320225 3/20 (15%)
TM helix 5 181..210 CDD:320225 4/28 (14%)
TM helix 6 228..258 CDD:320225 7/29 (24%)
TM helix 7 270..295 CDD:320225 7/24 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 317..368
Blue background indicates that the domain is not in the aligned region.

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