Protein Alignment ninaE and Opn1sw

DIOPT Version :10

• Sequence 1: NP_524407.1
• Gene: ninaE / 42367
• FlyBaseID: FBgn0002940
• Length: 373
• Species: Drosophila melanogaster
• Sequence 2: NP_112277.2
• Gene: Opn1sw / 81644
• RGDID: 621033
• Length: 346
• Species: Rattus norvegicus
• Alignment Length: 337
• Identity: 91/337 - (27%)
• Similarity: 150/337 - (44%)
• Gaps: 33/337 - (9%)

  Fly    47 PIWAKILTAYMIMIGMISWCG---NGVVIYIFATTKSLRTPANLLVINLAISDFGIMITNTPMMG 108
            |:||..|.|  ..:|.:.:.|   |..|:......|.||.|.|.:::|:::..|...|.:...:.
  Rat    28 PVWAFHLQA--AFMGFVFFAGTPLNATVLVATLHYKKLRQPLNYILVNVSLGGFLFCIFSVFTVF 90

  Fly   109 INLYFETWVLGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAGRPMTIPLALGKIAYI 173
            |......::.|..:|.:.|.|||..|..:.||:..::.:||.||.|...........||..:...
  Rat    91 IASCHGYFLFGRHVCALEAFLGSVAGLVTGWSLAFLAFERYLVICKPFGNIRFNSKHALTVVLIT 155

  Fly   174 WFMSSIWCLAPAFGWSRYVPEGNLTSCGIDYLERDWNPRS--YLIFYSIFVYYIPLFLICYSYWF 236
            |.:.....:.|.|||||::|||...|||.|:.......||  |..|..||.:.|||.|||:||:.
  Rat   156 WTIGIGVSIPPFFGWSRFIPEGLQCSCGPDWYTVGTKYRSEHYTWFLFIFCFIIPLSLICFSYFQ 220

  Fly   237 IIAAVSAHEKAMREQAKKMNVKSLRSSEDAEKSAEGKLAKVALVTITLWFMAWTP------YLVI 295
            ::..:.|.....:|.|             ..:.||.:::.:.:|.:..:.:.:.|      |:|.
  Rat   221 LLRTLRAVAAQQQESA-------------TTQKAEREVSHMVVVMVGSFCLCYVPYAALAMYMVN 272

  Fly   296 NCMGLFKFEGLTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCPCCVFGKVDDGKSSDA 360
            |     :..||........|.|:||:..||||:|...:.::|..:.|.  .|.....|:...|.:
  Rat   273 N-----RNHGLDLRLVTIPAFFSKSSCVYNPIIYCFMNKQFRACILEM--VCRKPMTDESDMSGS 330

  Fly   361 QSQATASEAESK 372
            |....::.:.||
  Rat   331 QKTEVSTVSSSK 342

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ninaE	NP_524407.1	7tmA_photoreceptors_insect	52..340	CDD:320207	81/298 (27%)
		TM helix 1	52..78	CDD:320207	6/28 (21%)
		TM helix 2	85..111	CDD:320207	5/25 (20%)
		TM helix 3	123..153	CDD:320207	11/29 (38%)
		TM helix 4	164..184	CDD:320207	3/19 (16%)
		TM helix 5	211..240	CDD:320207	14/30 (47%)
		TM helix 6	269..299	CDD:320207	7/35 (20%)
		TM helix 7	308..333	CDD:320207	9/24 (38%)
Opn1sw	NP_112277.2	7tmA_SWS1_opsin	33..312	CDD:320204	81/298 (27%)
		TM helix 1	34..60	CDD:320204	6/27 (22%)
		TM helix 2	67..94	CDD:320204	5/26 (19%)
		TM helix 3	105..135	CDD:320204	11/29 (38%)
		TM helix 4	146..168	CDD:320204	4/21 (19%)
		TM helix 5	195..225	CDD:320204	13/29 (45%)
		TM helix 6	240..270	CDD:320204	4/29 (14%)
		TM helix 7	280..305	CDD:320204	9/24 (38%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	322..346		5/21 (24%)