DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaE and OPN1MW2

DIOPT Version :9

Sequence 1:NP_524407.1 Gene:ninaE / 42367 FlyBaseID:FBgn0002940 Length:373 Species:Drosophila melanogaster
Sequence 2:NP_001041646.1 Gene:OPN1MW2 / 728458 HGNCID:26952 Length:364 Species:Homo sapiens


Alignment Length:336 Identity:103/336 - (30%)
Similarity:156/336 - (46%) Gaps:35/336 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 PIWAKILTA-YMIMIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITNTPMMGIN 110
            |.|...||: :||.:.:.|...||:|:......|.||.|.|.:::|||::|....:..:.:..:|
Human    49 PRWVYHLTSVWMIFVVIASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIASTISVVN 113

  Fly   111 LYFETWVLGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAGRPMTIPLALGKIAYIWF 175
            ..:..:|||..||.:.....|..|.:.:||:.:||.:|:.|:.|..........||:..||:.|.
Human   114 QVYGYFVLGHPMCVLEGYTVSLCGITGLWSLAIISWERWMVVCKPFGNVRFDAKLAIVGIAFSWI 178

  Fly   176 MSSIWCLAPAFGWSRYVPEGNLTSCGIDYLERDWNP--RSYLIFYSIFVYYIPLFLI--CY-SYW 235
            .:::|...|.||||||.|.|..||||.|.......|  :||:|...:.....||.:|  || ..|
Human   179 WAAVWTAPPIFGWSRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCITPLSIIVLCYLQVW 243

  Fly   236 FIIAAVSAHEKAMREQAKKMNVKSLRSSEDAEKSAEGKLAKVALVTITLWFMAWTPYLVINCMGL 300
            ..|.||:..:|               .||..:| ||.::.::.:|.:..:...|.||....|...
Human   244 LAIRAVAKQQK---------------ESESTQK-AEKEVTRMVVVMVLAFCFCWGPYAFFACFAA 292

  Fly   301 ----FKFEGLTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCPCCVFG-KVDDGKSSDA 360
                :.|.   ||.....|.|||||..|||::|...:.::|     .|...:|| |||||....:
Human   293 ANPGYPFH---PLMAALPAFFAKSATIYNPVIYVFMNRQFR-----NCILQLFGKKVDDGSELSS 349

  Fly   361 QSQATASEAES 371
            .|:...|...|
Human   350 ASKTEVSSVSS 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaENP_524407.1 7tmA_photoreceptors_insect 52..340 CDD:320207 90/297 (30%)
TM helix 1 53..77 CDD:320207 8/24 (33%)
TM helix 2 86..108 CDD:320207 5/21 (24%)
TM helix 3 124..146 CDD:320207 5/21 (24%)
TM helix 4 168..184 CDD:320207 4/15 (27%)
TM helix 5 212..235 CDD:320207 8/25 (32%)
TM helix 6 275..297 CDD:320207 4/21 (19%)
TM helix 7 308..333 CDD:320207 12/24 (50%)
OPN1MW2NP_001041646.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23
Required for 11-cis-retinal regeneration. /evidence=ECO:0000269|PubMed:30948514 17..43
7tm_4 61..>178 CDD:304433 33/116 (28%)
7tm_1 71..322 CDD:278431 83/269 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X120
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.910

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