DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaE and opn4a

DIOPT Version :9

Sequence 1:NP_524407.1 Gene:ninaE / 42367 FlyBaseID:FBgn0002940 Length:373 Species:Drosophila melanogaster
Sequence 2:NP_001122233.1 Gene:opn4a / 571624 ZFINID:ZDB-GENE-070111-2 Length:593 Species:Danio rerio


Alignment Length:389 Identity:133/389 - (34%)
Similarity:195/389 - (50%) Gaps:78/389 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 FPAMD-------PIWAKILTAYMIMIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGI 99
            ||.:|       .|.|.|||     :|:....||.:|||.|:.:::|||||||.:|||||:||.:
Zfish    65 FPTVDVPDHAHYTIGAVILT-----VGITGMLGNFLVIYAFSRSRTLRTPANLFIINLAITDFLM 124

  Fly   100 MITNTPMMGINLYFETWVLGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAG------ 158
            ..|..|:.......:.|:.|...|::||..|:.||..|:.::.:|::|||.||.:.:|.      
Zfish   125 CATQAPIFFTTSMHKRWIFGEKGCELYAFCGALFGICSMITLMVIAVDRYFVITRPLASIGVLSQ 189

  Fly   159 -RPMTIPLALGKIAYIWFMSSIWCLAPAFGWSRYVPEGNLTSCGIDYLERDWNPRSYLIFYSIFV 222
             |.:.|.|.      .|..|..|.|.|.||||.|||||.||||..||:....:.|:|.:...|||
Zfish   190 KRALLILLV------AWVYSLGWSLPPFFGWSAYVPEGLLTSCTWDYMTFTPSVRAYTMLLFIFV 248

  Fly   223 YYIPLFLICYSYWFIIAAVSAHEKAMREQAKKMNVKSLRSS--EDAEKSAEGKLAKVALVTITLW 285
            ::|||.:|.|.|:||..::    :...|...|:|..:.|.|  .......|.|:||:||:.|.::
Zfish   249 FFIPLIVIIYCYFFIFRSI----RTTNEAVGKINGDNKRDSMKRFQRLKNEWKMAKIALIVILMY 309

  Fly   286 FMAWTPYLVINCMGLFKFEG----LTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCPC 346
            .::|:||   :.:.|..|.|    |||......|..||::|.:|||:|.|:|||||||:.:..||
Zfish   310 VISWSPY---STVALTAFAGYSDFLTPYMNSVPAVIAKASAIHNPIIYAITHPKYRLAIAKYIPC 371

  Fly   347 -----CV------------------------------FGKVDDGKS-----SDAQSQATASEAE 370
                 |:                              |.:...|||     ||::|..|.:||:
Zfish   372 LRLLLCIPKRDLHSFHSSLMSTRRSTVTSQSSDMSGRFRRTSTGKSRLSSASDSESGWTDTEAD 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaENP_524407.1 7tmA_photoreceptors_insect 52..340 CDD:320207 114/300 (38%)
TM helix 1 53..77 CDD:320207 9/23 (39%)
TM helix 2 86..108 CDD:320207 11/21 (52%)
TM helix 3 124..146 CDD:320207 7/21 (33%)
TM helix 4 168..184 CDD:320207 4/15 (27%)
TM helix 5 212..235 CDD:320207 10/22 (45%)
TM helix 6 275..297 CDD:320207 8/21 (38%)
TM helix 7 308..333 CDD:320207 10/24 (42%)
opn4aNP_001122233.1 7tm_4 83..>257 CDD:304433 72/184 (39%)
7tm_1 92..354 CDD:278431 102/274 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 397..449 10/39 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 547..593
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590444
Domainoid 1 1.000 192 1.000 Domainoid score I3159
eggNOG 1 0.900 - - E33208_3BCHK
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 212 1.000 Inparanoid score I3623
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D389088at33208
OrthoFinder 1 1.000 - - FOG0001799
OrthoInspector 1 1.000 - - mtm6356
orthoMCL 1 0.900 - - OOG6_104608
Panther 1 1.100 - - O PTHR24240
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X120
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1211.800

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