DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ninaE and opn7a

DIOPT Version :9

Sequence 1:NP_524407.1 Gene:ninaE / 42367 FlyBaseID:FBgn0002940 Length:373 Species:Drosophila melanogaster
Sequence 2:NP_001303877.1 Gene:opn7a / 570397 ZFINID:ZDB-GENE-140106-15 Length:455 Species:Danio rerio


Alignment Length:327 Identity:86/327 - (26%)
Similarity:148/327 - (45%) Gaps:32/327 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 FPAMDPIWAKILTAYMI-MIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITNTP 105
            |.:..|:.|.|....:. :.|:.|.|||.:::|:....|.|..||...::||||||.|:.::..|
Zfish     9 FQSNIPVAADITVGIVYSLFGVCSLCGNSMLLYVSYKKKHLLKPAEFFIVNLAISDLGMTLSLYP 73

  Fly   106 MMGINLYFETWVLGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAGRPMTIPLALGKI 170
            :...:.....|:.|..:|.|||..|..||..|:.::.::|......:...:.|...:.......|
Zfish    74 LAVTSSIAHRWLYGRTVCVIYAFCGVLFGICSLTTLTILSTVCCLKVCYPLHGNRFSYEHGRMLI 138

  Fly   171 AYIWFMSSIWCLAPAFGWSRYVPEGNLTSCGIDYLERDWN--PRSYLIFYSIFVYYIPLFLICYS 233
            ...|..|.::..:|...|.:|.||...|:|.||:...:.|  .|||.....|..|.:|..:|..|
Zfish   139 VCAWAYSLVFACSPLAHWGQYGPEPYGTACCIDWAWSNQNSVARSYTTVLFIACYLVPCVIIIIS 203

  Fly   234 YWFIIAAVSAHEKAMRE----QAKKMNVKSLRSSEDAEKSAEGKLAKVALVTITLWFMAWTPYLV 294
            |..|:..|....:|:.:    |.:..|::::             :.|:::.....:|.||:||.:
Zfish   204 YTRILITVRESRRAVEQHVSAQTRMGNIQTI-------------IVKLSVAVCIGFFTAWSPYAL 255

  Fly   295 INCMGLF-KFEGLTPLNTIWGACFAKSAACYNPIVYGISHPKYR-LALKE----------KCPCC 347
            ::....| .|:.:.|:.....|.||||:..|||::|.:..|.:| |..|:          .|.|.
Zfish   256 VSMWAAFGHFDDIPPMAFAVPAMFAKSSTLYNPLIYLLLKPNFRHLLCKDMRSLRGVCMHHCLCQ 320

  Fly   348 VF 349
            .|
Zfish   321 CF 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaENP_524407.1 7tmA_photoreceptors_insect 52..340 CDD:320207 79/296 (27%)
TM helix 1 53..77 CDD:320207 6/24 (25%)
TM helix 2 86..108 CDD:320207 8/21 (38%)
TM helix 3 124..146 CDD:320207 7/21 (33%)
TM helix 4 168..184 CDD:320207 3/15 (20%)
TM helix 5 212..235 CDD:320207 8/22 (36%)
TM helix 6 275..297 CDD:320207 6/21 (29%)
TM helix 7 308..333 CDD:320207 10/24 (42%)
opn7aNP_001303877.1 7TM_GPCR_Srd 23..235 CDD:304638 57/224 (25%)
7tm_1 35..291 CDD:278431 71/268 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.