DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaE and opn5

DIOPT Version :9

Sequence 1:NP_524407.1 Gene:ninaE / 42367 FlyBaseID:FBgn0002940 Length:373 Species:Drosophila melanogaster
Sequence 2:NP_001186975.1 Gene:opn5 / 564181 ZFINID:ZDB-GENE-041001-179 Length:352 Species:Danio rerio


Alignment Length:318 Identity:95/318 - (29%)
Similarity:152/318 - (47%) Gaps:35/318 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 DPIWAK-------ILTAYMIMIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITN 103
            ||..:|       :...|:::||::|..|||.|:|:....|:...|..::.:||||.||||.::.
Zfish    20 DPFASKLSKEADIVAAFYILVIGILSATGNGYVMYMTFKRKTKLKPPEIMTLNLAIFDFGISVSG 84

  Fly   104 TPMMGINLYFETWVLGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAGRPMTIPLALG 168
            .|...::.:...|:.|...|..|...|..|||.|:.:|.::|.|||..|.....|..:....|..
Zfish    85 KPFFIVSSFSHRWLFGWQGCRYYGWAGFFFGCGSLITMTVVSFDRYLKICHLRYGTWLKRHHAFL 149

  Fly   169 KIAYIWFMSSIWCLAPAFGWSRYVPEGNLTSCGIDYLERDW------NPRSYLIFYSIFVYYIPL 227
            .:.:||..::.|...|..||..|.||...|||.:|:    |      :.:|:::....|....|.
Zfish   150 SVVFIWAYAAFWATMPVVGWGNYAPEPFGTSCTLDW----WLTQASVSGQSFVMCMLFFCLIFPT 210

  Fly   228 FLICYSYWFIIAAVSAHEKAMREQAKKMNVKSLRSSEDAEKSAEGKLAKVALVTITLWFMAWTPY 292
            .:|.:||..||..|       :..||:::....|:..:  .|.|.||.|||::....:.:||.||
Zfish   211 VIIVFSYVMIIFKV-------KSSAKEVSHFDTRNKNN--HSLEMKLTKVAMLICAGFLIAWIPY 266

  Fly   293 LVINCMGLFKFEGLTPLN-TIWGACFAKSAACYNPIVYGISHPKYRLALKEKC--PCC 347
            .|::.|..|......|:. ::.....|||:|.||||:|.:      :..|:||  .||
Zfish   267 AVVSVMSAFGEPDSVPIPVSVVPTLLAKSSAMYNPIIYQV------IDCKKKCVKSCC 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaENP_524407.1 7tmA_photoreceptors_insect 52..340 CDD:320207 87/294 (30%)
TM helix 1 53..77 CDD:320207 9/23 (39%)
TM helix 2 86..108 CDD:320207 9/21 (43%)
TM helix 3 124..146 CDD:320207 7/21 (33%)
TM helix 4 168..184 CDD:320207 3/15 (20%)
TM helix 5 212..235 CDD:320207 5/22 (23%)
TM helix 6 275..297 CDD:320207 8/21 (38%)
TM helix 7 308..333 CDD:320207 10/25 (40%)
opn5NP_001186975.1 7tm_1 48..304 CDD:278431 82/268 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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