Protein Alignment ninaE and opn6b

DIOPT Version :10

• Sequence 1: NP_524407.1
• Gene: ninaE / 42367
• FlyBaseID: FBgn0002940
• Length: 373
• Species: Drosophila melanogaster
• Sequence 2: NP_001303879.1
• Gene: opn6b / 557053
• ZFINID: ZDB-GENE-030616-402
• Length: 391
• Species: Danio rerio
• Alignment Length: 323
• Identity: 94/323 - (29%)
• Similarity: 141/323 - (43%)
• Gaps: 69/323 - (21%)

  Fly    56 YMIMIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITNTPMMGINLYFET----- 115
            |::::|.:||.|||.||.:....:....|.:.|.:||||||..|.|... ..||...|:.
Zfish    27 YLVILGWLSWIGNGTVILLLTKQRKALEPQDFLTLNLAISDASISIFGY-SRGILEVFDVFRDEG 90

  Fly   116 ------WVLGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAGRP--------MTIPLA 166
                  |.     |.:...|...||..||.::..||:.||   :||.  .|        ..|.|.
Zfish    91 YLIKTFWT-----CKVDGFLILLFGLISINTLTAISVIRY---IKGC--HPHHAHHINKRNICLV 145

  Fly   167 LGKIAYIWFMSSIWCLAPAFGWSRYVPEGNLTSCGIDYLERDWNPRSYLIFYSIFV-------YY 224
               |..:|.....|..||..||..|...|..| |     |.||....|.|.:.::|       ::
Zfish   146 ---ITAVWLFCLFWAGAPLLGWGSYRARGYGT-C-----EIDWTRALYSIPFKLYVIGIFFFNFF 201

  Fly   225 IPLFLICYSYWFIIAAVSAHEKAMREQAKKMNVKSLRSSE-----DAEKSAEGKLAKVALVTITL 284
            :|||:|.::|..||..|::..|               ||:     :.:|..|..:.:|:|:....
Zfish   202 VPLFIIVFAYVSIIRTVNSSHK---------------SSQGGDVSERQKKIERSITRVSLILCAA 251

  Fly   285 WFMAWTPYLVINCMGLFKFEGLTPLNTIWGACFAKSAACYNPIVY-GISHPKYRLALKEKCPC 346
            :.:||:||.||:......:: :..||.|..:.|||||:.|||.:| |:| .|:|..|:....|
Zfish   252 FLLAWSPYAVISMWSALGYQ-IPTLNGILASLFAKSASFYNPFIYIGMS-SKFRKDLQALFYC 312

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ninaE	NP_524407.1	7tmA_photoreceptors_insect	52..340	CDD:320207	92/315 (29%)
		TM helix 1	52..78	CDD:320207	9/21 (43%)
		TM helix 2	85..111	CDD:320207	11/25 (44%)
		TM helix 3	123..153	CDD:320207	10/29 (34%)
		TM helix 4	164..184	CDD:320207	4/19 (21%)
		TM helix 5	211..240	CDD:320207	10/35 (29%)
		TM helix 6	269..299	CDD:320207	9/29 (31%)
		TM helix 7	308..333	CDD:320207	13/25 (52%)
opn6b	NP_001303879.1	7tmA_Opsin5_neuropsin	22..306	CDD:320202	92/315 (29%)
		TM helix 1	23..49	CDD:320202	9/21 (43%)
		TM helix 2	56..83	CDD:320202	11/27 (41%)
		TM helix 3	99..129	CDD:320202	11/32 (34%)
		TM helix 4	142..160	CDD:320202	5/20 (25%)
		TM helix 5	188..218	CDD:320202	8/29 (28%)
		TM helix 6	236..266	CDD:320202	9/29 (31%)
		TM helix 7	274..299	CDD:320202	13/24 (54%)