Protein Alignment ninaE and Opn3

DIOPT Version :10

• Sequence 1: NP_524407.1
• Gene: ninaE / 42367
• FlyBaseID: FBgn0002940
• Length: 373
• Species: Drosophila melanogaster
• Sequence 2: NP_001178862.1
• Gene: Opn3 / 498289
• RGDID: 1594385
• Length: 400
• Species: Rattus norvegicus
• Alignment Length: 328
• Identity: 86/328 - (26%)
• Similarity: 156/328 - (47%)
• Gaps: 55/328 - (16%)

  Fly    36 SPYWNQFPAMDPIWAKILTAY---MIMIGMISWCGNG---VVIYIFATTKSLRTPANLLVINLAI 94
            :|...:.||  |:::.  |||   .:::|.::..|.|   :|:.:::....||||.:|.::||::
  Rat    23 APAGTRSPA--PLFSP--TAYERLALLLGCLALLGVGGNLLVLLLYSKFPRLRTPTHLFLVNLSL 83

  Fly    95 SDFGIMITNTPMMGINLYFET-----WVLGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVK 154
            .|  ::::   :.|:...|.:     ||...:.|......||.||..||.::.:::.:||   ::
  Rat    84 GD--LLVS---LFGVTFTFASCLRNGWVWDAVGCAWDGFSGSLFGFVSITTLTVLAYERY---IR 140

  Fly   155 GMAGRPMTIPLALGKIAYIWFMSSIWCLAPAFGWSRYVPEGNLTSCGIDYLERDWNPRSYLIFYS 219
            .:..|.:....|...|.|||..|..|..||..||:||:.:.:...|.:|:..:|.|..|:::|..
  Rat   141 VVHARVINFSWAWRAITYIWLYSLAWAGAPLLGWNRYILDVHGLGCTVDWKSKDANDSSFVLFLF 205

  Fly   220 IFVYYIPLFLICYSYWFIIAAVSAHEKAMREQAKKMNVKSLRSSEDAEK-------SAEGKLAKV 277
            :....:|:.:|.:.|..|:                .:|:.||..||.:.       ..|.|:||:
  Rat   206 LGCLVVPMGIIAHCYGHIL----------------YSVRMLRCVEDLQTIQVIKMLRYEKKVAKM 254

  Fly   278 ALVTITLWFMAWTPY-----LVINCMGLFKFEGLTPLNTIWGACFAKSAACYNPIVYGISHPKYR 337
            ..:...::...|.||     ||:|..|..    :||..:|....||||:..|||::|.....|:|
  Rat   255 CFLMAFVFLTCWMPYVVTRFLVVNGYGHL----VTPTVSIVSYLFAKSSTVYNPVIYIFMIRKFR 315

  Fly   338 LAL 340
            .:|
  Rat   316 RSL 318

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ninaE	NP_524407.1	7tmA_photoreceptors_insect	52..340	CDD:320207	81/310 (26%)
		TM helix 1	52..78	CDD:320207	7/31 (23%)
		TM helix 2	85..111	CDD:320207	5/25 (20%)
		TM helix 3	123..153	CDD:320207	9/29 (31%)
		TM helix 4	164..184	CDD:320207	7/19 (37%)
		TM helix 5	211..240	CDD:320207	6/28 (21%)
		TM helix 6	269..299	CDD:320207	10/34 (29%)
		TM helix 7	308..333	CDD:320207	10/24 (42%)
Opn3	NP_001178862.1	7tm_GPCRs	64..317	CDD:475119	74/280 (26%)
		TM helix 2	75..97	CDD:320206	5/26 (19%)
		TM helix 3	113..135	CDD:320206	6/21 (29%)
		TM helix 4	154..170	CDD:320206	6/15 (40%)
		TM helix 5	198..221	CDD:320206	4/22 (18%)
		TM helix 6	252..274	CDD:320206	5/21 (24%)
		TM helix 7	286..311	CDD:320206	10/24 (42%)