DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaE and Rh7

DIOPT Version :9

Sequence 1:NP_524407.1 Gene:ninaE / 42367 FlyBaseID:FBgn0002940 Length:373 Species:Drosophila melanogaster
Sequence 2:NP_524035.2 Gene:Rh7 / 39389 FlyBaseID:FBgn0036260 Length:483 Species:Drosophila melanogaster


Alignment Length:320 Identity:113/320 - (35%)
Similarity:178/320 - (55%) Gaps:25/320 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 DMAHL--ISPYWNQFPAMDPIWAKILTAYMIMIGMISWCGNGVVIYIFATTKSLRTPANLLVINL 92
            |::::  ::|:|.||.........|:.|...:|.::...||..||::||..||||||||:||:||
  Fly    94 DLSYIAKVNPFWLQFEPPKSSTFLIMAALYCLISVVGCVGNAFVIFMFANRKSLRTPANILVMNL 158

  Fly    93 AISDFGIMITNTPMMGINLYFETWVLGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMA 157
            ||.|| :|:...|:...|...|...||.:.|.:|..:|...|..:|.::..|:||||.|:|..: 
  Fly   159 AICDF-LMLIKCPIAIYNNIKEGPALGDIACRLYGFVGGLSGTCAIGTLTAIALDRYNVVVHPL- 221

  Fly   158 GRPMTIPLALGK---IAYIWFMSSIWCLAPA--FGWSRYVPEGNLTSCGIDYLERDWNPRSYLIF 217
             :|:.....|..   |..||..|.::.:.||  .|.|.|||||.||:|..|||.::...|.::..
  Fly   222 -QPLRRCSRLRSYLIILLIWCYSFLFAVMPALDIGLSVYVPEGFLTTCSFDYLNKEMPARIFMAL 285

  Fly   218 YSIFVYYIPLFLICYSYWFIIAAVSAHEKAMREQAKKMNVKSLRSSEDAEKSAEGKLAKVALVTI 282
            :.:..|.|||..|.|||::|:..|             .....::|::|..|: |.|||.:....|
  Fly   286 FFVAAYCIPLTSIVYSYFYILKVV-------------FTASRIQSNKDKAKT-EQKLAFIVAAII 336

  Fly   283 TLWFMAWTPYLVINCMGLFKFE-GLTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALK 341
            .|||:||:||.::..||:|..| .:|||.::..|.|.|:|||.:|.:|..:||::|:.::
  Fly   337 GLWFLAWSPYAIVAMMGVFGLERHITPLGSMIPALFCKTAACVDPYLYAATHPRFRVEVR 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaENP_524407.1 7tmA_photoreceptors_insect 52..340 CDD:320207 108/293 (37%)
TM helix 1 53..77 CDD:320207 7/23 (30%)
TM helix 2 86..108 CDD:320207 11/21 (52%)
TM helix 3 124..146 CDD:320207 5/21 (24%)
TM helix 4 168..184 CDD:320207 4/18 (22%)
TM helix 5 212..235 CDD:320207 8/22 (36%)
TM helix 6 275..297 CDD:320207 9/21 (43%)
TM helix 7 308..333 CDD:320207 10/24 (42%)
Rh7NP_524035.2 7tm_4 125..>247 CDD:304433 47/124 (38%)
7tm_1 133..384 CDD:278431 101/267 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D389088at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.920

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