DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaE and Rh7

DIOPT Version :10

Sequence 1:NP_524407.1 Gene:ninaE / 42367 FlyBaseID:FBgn0002940 Length:373 Species:Drosophila melanogaster
Sequence 2:NP_524035.2 Gene:Rh7 / 39389 FlyBaseID:FBgn0036260 Length:483 Species:Drosophila melanogaster


Alignment Length:320 Identity:113/320 - (35%)
Similarity:178/320 - (55%) Gaps:25/320 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 DMAHL--ISPYWNQFPAMDPIWAKILTAYMIMIGMISWCGNGVVIYIFATTKSLRTPANLLVINL 92
            |::::  ::|:|.||.........|:.|...:|.::...||..||::||..||||||||:||:||
  Fly    94 DLSYIAKVNPFWLQFEPPKSSTFLIMAALYCLISVVGCVGNAFVIFMFANRKSLRTPANILVMNL 158

  Fly    93 AISDFGIMITNTPMMGINLYFETWVLGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMA 157
            ||.|| :|:...|:...|...|...||.:.|.:|..:|...|..:|.::..|:||||.|:|..: 
  Fly   159 AICDF-LMLIKCPIAIYNNIKEGPALGDIACRLYGFVGGLSGTCAIGTLTAIALDRYNVVVHPL- 221

  Fly   158 GRPMTIPLALGK---IAYIWFMSSIWCLAPA--FGWSRYVPEGNLTSCGIDYLERDWNPRSYLIF 217
             :|:.....|..   |..||..|.::.:.||  .|.|.|||||.||:|..|||.::...|.::..
  Fly   222 -QPLRRCSRLRSYLIILLIWCYSFLFAVMPALDIGLSVYVPEGFLTTCSFDYLNKEMPARIFMAL 285

  Fly   218 YSIFVYYIPLFLICYSYWFIIAAVSAHEKAMREQAKKMNVKSLRSSEDAEKSAEGKLAKVALVTI 282
            :.:..|.|||..|.|||::|:..|             .....::|::|..|: |.|||.:....|
  Fly   286 FFVAAYCIPLTSIVYSYFYILKVV-------------FTASRIQSNKDKAKT-EQKLAFIVAAII 336

  Fly   283 TLWFMAWTPYLVINCMGLFKFE-GLTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALK 341
            .|||:||:||.::..||:|..| .:|||.::..|.|.|:|||.:|.:|..:||::|:.::
  Fly   337 GLWFLAWSPYAIVAMMGVFGLERHITPLGSMIPALFCKTAACVDPYLYAATHPRFRVEVR 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaENP_524407.1 7tmA_photoreceptors_insect 52..340 CDD:320207 108/293 (37%)
TM helix 1 52..78 CDD:320207 9/25 (36%)
TM helix 2 85..111 CDD:320207 12/25 (48%)
TM helix 3 123..153 CDD:320207 11/29 (38%)
TM helix 4 164..184 CDD:320207 5/22 (23%)
TM helix 5 211..240 CDD:320207 10/28 (36%)
TM helix 6 269..299 CDD:320207 12/29 (41%)
TM helix 7 308..333 CDD:320207 10/24 (42%)
Rh7NP_524035.2 7tm_GPCRs 118..395 CDD:475119 108/293 (37%)
TM helix 1 119..143 CDD:320207 7/23 (30%)
TM helix 2 152..173 CDD:320207 11/21 (52%)
TM helix 3 189..211 CDD:320207 5/21 (24%)
TM helix 4 234..250 CDD:320207 4/15 (27%)
TM helix 5 280..303 CDD:320207 8/22 (36%)
TM helix 6 329..351 CDD:320207 9/21 (43%)
TM helix 7 363..388 CDD:320207 10/24 (42%)

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