Protein Alignment ninaE and tmtopsa

DIOPT Version :10

• Sequence 1: NP_524407.1
• Gene: ninaE / 42367
• FlyBaseID: FBgn0002940
• Length: 373
• Species: Drosophila melanogaster
• Sequence 2: NP_001112371.1
• Gene: tmtopsa / 359832
• ZFINID: ZDB-GENE-030716-3
• Length: 387
• Species: Danio rerio
• Alignment Length: 328
• Identity: 84/328 - (25%)
• Similarity: 144/328 - (43%)
• Gaps: 25/328 - (7%)

  Fly    40 NQFPAMDPIWAKILTAYMIMIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITNT 104
            :.:..:.|....::...:..||...:..|.:|:.:|...|.||:|.|.|::|:.:||..:.:..|
Zfish    30 SSYRTLSPTGHILVAVSLGFIGTFGFLNNLLVLVLFGRYKVLRSPINFLLVNICLSDLLVCVLGT 94

  Fly   105 PMMGINLYFETWVLGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAGRPMTIPLALGK 169
            |..........|::|...|..|....|..|..|:.|:.::|.:||..::.............:|.
Zfish    95 PFSFAASTQGRWLIGDTGCVWYGFANSLLGIVSLISLAVLSYERYCTMMGSTEADATNYKKVIGG 159

  Fly   170 IAYIWFMSSIWCLAPAFGWSRYVPEGNLTSCGIDYLERDWNPRSYLIFYSIFVYYIPLFLICYSY 234
            :...|..|.||.|.|.||||||.|||..|:|.:|:..:..|..||:|...||...:|..:|.:.|
Zfish   160 VLMSWIYSLIWTLPPLFGWSRYGPEGPGTTCSVDWTTKTANNISYIICLFIFCLIVPFLVIIFCY 224

  Fly   235 WFIIAAVSAHEKAMREQAKKMNVKSLRSSEDAEKSAEGKLAKVALVTITL---WFMAWTPYLVIN 296
            ..::.|:        :|...:|....|..|.          :|.|:.||:   :.:.|.||.::.
Zfish   225 GKLLHAI--------KQVSSVNTSVSRKREH----------RVLLMVITMVVFYLLCWLPYGIMA 271

  Fly   297 CMGLFKFEGL-TPLNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCPCCVFGKVDDGKSSDA 360
            .:..|...|| |...:|..:..|||:...||::|...:.::....:....|   .|...|.|..:
Zfish   272 LLATFGAPGLVTAEASIVPSILAKSSTVINPVIYIFMNKQFYRCFRALLNC---DKPQRGSSLKS 333

  Fly   361 QSQ 363
            .|:
Zfish   334 SSK 336

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ninaE	NP_524407.1	7tmA_photoreceptors_insect	52..340	CDD:320207	78/291 (27%)
		TM helix 1	52..78	CDD:320207	5/25 (20%)
		TM helix 2	85..111	CDD:320207	7/25 (28%)
		TM helix 3	123..153	CDD:320207	9/29 (31%)
		TM helix 4	164..184	CDD:320207	6/19 (32%)
		TM helix 5	211..240	CDD:320207	8/28 (29%)
		TM helix 6	269..299	CDD:320207	7/32 (22%)
		TM helix 7	308..333	CDD:320207	7/24 (29%)
tmtopsa	NP_001112371.1	7tmA_tmt_opsin	41..316	CDD:320214	78/292 (27%)
		TM helix 1	42..68	CDD:320214	5/25 (20%)
		TM helix 2	75..101	CDD:320214	7/25 (28%)
		TM helix 3	113..143	CDD:320214	9/29 (31%)
		TM helix 4	154..176	CDD:320214	7/21 (33%)
		TM helix 5	201..231	CDD:320214	8/29 (28%)
		TM helix 6	244..274	CDD:320214	8/39 (21%)
		TM helix 7	284..309	CDD:320214	7/24 (29%)