DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaE and opn4.1

DIOPT Version :10

Sequence 1:NP_524407.1 Gene:ninaE / 42367 FlyBaseID:FBgn0002940 Length:373 Species:Drosophila melanogaster
Sequence 2:NP_840074.2 Gene:opn4.1 / 352918 ZFINID:ZDB-GENE-030314-2 Length:500 Species:Danio rerio


Alignment Length:373 Identity:121/373 - (32%)
Similarity:182/373 - (48%) Gaps:55/373 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 PHFAPLSNGSVVDKVTPDMAHLISPYWNQFPAMDPIWAKILTAYMIMIGMISWCGNGVVIYIFAT 77
            ||..|     .||  .||.||.                 |:.:.::::|:....||.:|:|:|..
Zfish    51 PHPFP-----TVD--VPDHAHY-----------------IIGSVILIVGITGVIGNALVVYVFCR 91

  Fly    78 TKSLRTPANLLVINLAISDFGIMITNTPMMGINLYFETWVLGPMMCDIYAGLGSAFGCSSIWSMC 142
            :::|||..|:.::|||::||.:.:|.:|:.........||.|...|::||..|:.||..|:.::.
Zfish    92 SRTLRTAGNMFIVNLAVADFLMSVTQSPVFFAASLHRRWVFGERPCELYAFCGALFGICSMMTLT 156

  Fly   143 MISLDRYQVIVKGMAGRPMTIPLAL----------GKIAYIWFMSSIWCLAPAFGWSRYVPEGNL 197
            .|:.||...|         |.||||          ..:..:|..|..|.|.|.||||.|||||..
Zfish   157 AIAADRCLAI---------TQPLALVSRVSRRKAGAVLVVVWLYSLGWSLPPFFGWSAYVPEGLQ 212

  Fly   198 TSCGIDYLERDWNPRSYLIFYSIFVYYIPLFLICYSYWFIIAAVSAHEKAMREQAKKMNVKSLRS 262
            |||..||:....:.|:|.|...:||::|||.:|...|:.|...:.|..|.:||.......|....
Zfish   213 TSCSWDYMTFTPSVRAYTILLFVFVFFIPLGIIGSCYFAIFQTIRAAGKEIRELDCGETHKVYER 277

  Fly   263 SEDAEKSAEGKLAKVALVTITLWFMAWTPYLVI---NCMGLFKFEGLTPLNTIWGACFAKSAACY 324
            .::     |.|:||||||.|.|:.::|:||.|:   ...|...|  |||......|..||::|.:
Zfish   278 MQN-----EWKMAKVALVVIVLFIISWSPYSVVALTATAGYSHF--LTPYMNSVPAVIAKASAIH 335

  Fly   325 NPIVYGISHPKYRLALKEKCPCCVFGKVDDGKSSDAQSQATASEAESK 372
            |||:|.|:|||||:|:....|  |...:...|..|.:|..::....|:
Zfish   336 NPIIYAITHPKYRVAIARYIP--VLRPILRVKEKDLRSSFSSGSVSSR 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaENP_524407.1 7tmA_photoreceptors_insect 52..340 CDD:320207 105/300 (35%)
TM helix 1 52..78 CDD:320207 7/25 (28%)
TM helix 2 85..111 CDD:320207 8/25 (32%)
TM helix 3 123..153 CDD:320207 10/29 (34%)
TM helix 4 164..184 CDD:320207 8/29 (28%)
TM helix 5 211..240 CDD:320207 11/28 (39%)
TM helix 6 269..299 CDD:320207 14/32 (44%)
TM helix 7 308..333 CDD:320207 10/24 (42%)
opn4.1NP_840074.2 7tmA_Melanopsin 65..351 CDD:320458 105/318 (33%)
TM helix 1 66..92 CDD:320458 7/25 (28%)
TM helix 2 99..125 CDD:320458 8/25 (32%)
TM helix 3 137..167 CDD:320458 11/38 (29%)
TM helix 4 179..201 CDD:320458 5/21 (24%)
TM helix 5 226..256 CDD:320458 11/29 (38%)
TM helix 6 279..309 CDD:320458 14/34 (41%)
TM helix 7 319..344 CDD:320458 10/24 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 404..428
Blue background indicates that the domain is not in the aligned region.

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