Protein Alignment ninaE and Rgr

DIOPT Version :10

• Sequence 1: NP_524407.1
• Gene: ninaE / 42367
• FlyBaseID: FBgn0002940
• Length: 373
• Species: Drosophila melanogaster
• Sequence 2: XP_038950404.1
• Gene: Rgr / 306307
• RGDID: 1309174
• Length: 300
• Species: Rattus norvegicus
• Alignment Length: 295
• Identity: 74/295 - (25%)
• Similarity: 117/295 - (39%)
• Gaps: 62/295 - (21%)

  Fly    68 NGVVIYIFATTKSLRTPANLLVINLAISDFGIMITNTPMMGIN---------LYFETWVLGPMMC 123
            ||:.|:.|..|..||||:||||::||::|.||.: |..:..::         :....|..|...|
  Rat    34 NGLTIFSFCKTPDLRTPSNLLVLSLALADTGISL-NALVAAVSSLLRVILPIVSHRRWPHGSEGC 97

  Fly   124 DIYAGLGSAFGCSSIWSMCMISLDRY-QVIVKGMAGRPMTIPLALGKIAYIWFMSSIWCLAPAFG 187
            .::...|.|...:||.....|:..|| ....:........|||.|    ::|..|:.|...|..|
  Rat    98 RVHGFQGFATALASICGSAAIAWGRYHHYCTRRQLAWDTAIPLVL----FVWLSSAFWASLPLMG 158

  Fly   188 WSRYVPEGNLTSCGIDYLERDWNPRSYLIFYSIFVYYIPLFLICYSYWFIIAAVSAHEKAMREQA 252
            |..|..|...|.|.:||...|.|..|:|...:.|.:.:|||:...||.|:      .:|..|...
  Rat   159 WGHYDYEPVGTCCTLDYSRGDRNFISFLFTMAFFNFLVPLFITHTSYRFM------EQKLSRSGH 217

  Fly   253 KKMNVKSLRSSEDAEKSAEGKLAKVALVTITLWFMAWTPYLVINCMGLFKFEG------LTPLNT 311
            .::|.           :..|::.          .:.|.||.:     |:.:..      ::|...
  Rat   218 LQVNT-----------TLPGRML----------LLGWGPYAL-----LYLYAAVADVSFISPKLQ 256

  Fly   312 IWGACFAKSAACYNPIVYGISHPKYRLALKEKCPC 346
            :..|..||:....|.|.|         ||:.:..|
  Rat   257 MVPALIAKTMPTINAINY---------ALRSEMVC 282

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ninaE	NP_524407.1	7tmA_photoreceptors_insect	52..340	CDD:320207	71/287 (25%)
		TM helix 1	52..78	CDD:320207	4/9 (44%)
		TM helix 2	85..111	CDD:320207	10/34 (29%)
		TM helix 3	123..153	CDD:320207	8/30 (27%)
		TM helix 4	164..184	CDD:320207	6/19 (32%)
		TM helix 5	211..240	CDD:320207	9/28 (32%)
		TM helix 6	269..299	CDD:320207	4/29 (14%)
		TM helix 7	308..333	CDD:320207	7/24 (29%)
Rgr	XP_038950404.1	7tmA_Retinal_GPR	17..286	CDD:320200	74/295 (25%)
		TM helix 1	18..44	CDD:320200	4/9 (44%)
		TM helix 2	51..77	CDD:320200	10/26 (38%)
		TM helix 3	97..127	CDD:320200	8/29 (28%)
		TM helix 4	135..155	CDD:320200	7/23 (30%)
		TM helix 5	182..211	CDD:320200	9/34 (26%)
		TM helix 6	213..243	CDD:320200	7/55 (13%)
		TM helix 7	253..278	CDD:320200	9/33 (27%)