Protein Alignment ninaE and exorh

DIOPT Version :10

• Sequence 1: NP_524407.1
• Gene: ninaE / 42367
• FlyBaseID: FBgn0002940
• Length: 373
• Species: Drosophila melanogaster
• Sequence 2: NP_571287.1
• Gene: exorh / 30459
• ZFINID: ZDB-GENE-991229-12
• Length: 354
• Species: Danio rerio
• Alignment Length: 379
• Identity: 111/379 - (29%)
• Similarity: 187/379 - (49%)
• Gaps: 52/379 - (13%)

  Fly    12 GPHF-APLSN--GSVVDKVTPDMAHLISPYWNQFPAMDPIWAKILTAYMIMIGMISWCGNGVVIY 73
            ||:| .|:||  |.|.........:|..|:  ||        .:|.|||:.:.:.|:..|.:.:|
Zfish     6 GPNFYVPMSNRTGLVRSPFEEPQYYLAEPW--QF--------SLLAAYMLFLILGSFPINALTLY 60

  Fly    74 IFATTKSLRTPANLLVINLAISDFGIMI---TNTPMMGINLYFETWVLGPMMCDI---YAGLGSA 132
            :....|.||||.|.:::|||::|..:::   |.|....::.||   :||...|:|   :|.||
Zfish    61 VTVQHKKLRTPLNYILLNLAVADLFMVLGGFTVTLYTALHGYF---LLGVTGCNIEGFFATLG-- 120

  Fly   133 FGCSSIWSMCMISLDRYQVIVKGMAGRPMTIPLALGKIAYIWFMSSIWCLAPAFGWSRYVPEGNL 197
             |..::||:.:::::||.|:.|.|:........|:..:.:.|.|:....:.|..|||||:|||..
Zfish   121 -GEIALWSLVVLAIERYIVVCKPMSTFRFGEKHAIIGVGFTWVMALTCAVPPLLGWSRYIPEGMQ 184

  Fly   198 TSCGIDYLERDWNPR------SYLIFYSIFVYYIPLFLICYSYWFIIAAVSAHEKAMREQAKKMN 256
            .||||||    :.|:      |::|:..|..:.|||.:|.:.|..::..|.|.....:|
Zfish   185 CSCGIDY----YTPKPEVHNTSFVIYMFILHFSIPLLIIFFCYSRLLCTVRAAAAQQQE------ 239

  Fly   257 VKSLRSSEDAEKSAEGKLAKVALVTITLWFMAWTPYLVINCMGLFKFEG--LTPLNTIWGACFAK 319
                  ||..:: ||.::.::.:|.:..:.:.|.||..: ...:|..:|  ..|:.....|.|||
Zfish   240 ------SETTQR-AEREVTRMVVVMVIAFLVCWVPYASV-AWYIFANQGAEFGPVFMTVPAFFAK 296

  Fly   320 SAACYNPIVYGISHPKYRLALKEKCPCCVFGKVDDGKSSDAQSQATASEAESKA 373
            |||.|||::|.:.:.::|..:.... ||....:.:.:||.|.|..|.|...|.|
Zfish   297 SAALYNPVIYIMLNRQFRNCMLSTV-CCGKNPLAEDESSSAVSSKTQSSVVSSA 349

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ninaE	NP_524407.1	7tmA_photoreceptors_insect	52..340	CDD:320207	89/301 (30%)
		TM helix 1	52..78	CDD:320207	7/25 (28%)
		TM helix 2	85..111	CDD:320207	7/28 (25%)
		TM helix 3	123..153	CDD:320207	11/32 (34%)
		TM helix 4	164..184	CDD:320207	3/19 (16%)
		TM helix 5	211..240	CDD:320207	9/34 (26%)
		TM helix 6	269..299	CDD:320207	6/29 (21%)
		TM helix 7	308..333	CDD:320207	12/24 (50%)
exorh	NP_571287.1	Rhodopsin_N	3..37	CDD:313611	10/32 (31%)
		7tmA_MWS_opsin	38..317	CDD:381742	89/302 (29%)
		TM helix 1	39..65	CDD:381742	7/25 (28%)
		TM helix 2	72..99	CDD:381742	7/26 (27%)
		TM helix 3	110..140	CDD:381742	11/32 (34%)
		TM helix 4	151..173	CDD:381742	4/21 (19%)
		TM helix 5	200..230	CDD:381742	8/29 (28%)
		TM helix 6	245..275	CDD:381742	6/31 (19%)
		TM helix 7	285..310	CDD:381742	12/24 (50%)