Protein Alignment ninaE and opn1lw1

DIOPT Version :10

• Sequence 1: NP_524407.1
• Gene: ninaE / 42367
• FlyBaseID: FBgn0002940
• Length: 373
• Species: Drosophila melanogaster
• Sequence 2: NP_001300644.1
• Gene: opn1lw1 / 30413
• ZFINID: ZDB-GENE-990604-41
• Length: 357
• Species: Danio rerio
• Alignment Length: 336
• Identity: 105/336 - (31%)
• Similarity: 164/336 - (48%)
• Gaps: 43/336 - (12%)

  Fly    47 PIWA-KILTAYMIMIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITNTPMMGIN 110
            |.|. .:.|.:|..:.:.|...||:|:...|..|.||.|.|.:::||||:|.|..:..:.:..||
Zfish    46 PRWVYNVATVWMFFVVVASTFTNGLVLVATAKFKKLRHPLNWILVNLAIADLGETLFASTISVIN 110

  Fly   111 LYFETWVLGPMMCDIYAGLG-SAFGCSSIWSMCMISLDRYQVIVKGMAGRPMTIPLALGKIAYIW 174
            .:|..::||..|| |:.|.. |..|.:::||:.:||.:|:.|:.|...........|...|.:.|
Zfish   111 QFFGYFILGHPMC-IFEGYTVSVCGIAALWSLTVISWERWVVVCKPFGNVKFDAKWASAGIIFSW 174

  Fly   175 FMSSIWCLAPAFGWSRYVPEGNLTSCGIDYLERDWNP--RSYLIFYSIFVYYIPL--FLICY-SY 234
            ..::.||..|.||||||.|.|..||||.|......:|  :||::...|....|||  .::|| :.
Zfish   175 VWAAAWCAPPIFGWSRYWPHGLKTSCGPDVFSGSEDPGVQSYMVVLMITCCIIPLAIIILCYIAV 239

  Fly   235 WFIIAAVSAHEKAMREQAKKMNVKSLRSSEDAEKSAEGKLAKVALVTITLWFMAWTPYLVINCMG 299
            :..|.||:..:|               .||..:| ||.:::::.:|.|..:...|.||....|..
Zfish   240 YLAIHAVAQQQK---------------DSESTQK-AEKEVSRMVVVMIFAYCFCWGPYTFFACFA 288

  Fly   300 L----FKFEGLTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCPCCVFG-KVDDGKSSD 359
            .    :.|.   ||.....|.|||||..|||::|...:.::|:.:.:     :|| |||||
Zfish   289 AANPGYAFH---PLAAAMPAYFAKSATIYNPVIYVFMNRQFRVCIMQ-----LFGKKVDDG---- 341

  Fly   360 AQSQATASEAE 370
              |:.:.|:.|
Zfish   342 --SEVSTSKTE 350

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ninaE	NP_524407.1	7tmA_photoreceptors_insect	52..340	CDD:320207	93/297 (31%)
		TM helix 1	52..78	CDD:320207	7/25 (28%)
		TM helix 2	85..111	CDD:320207	8/25 (32%)
		TM helix 3	123..153	CDD:320207	11/30 (37%)
		TM helix 4	164..184	CDD:320207	5/19 (26%)
		TM helix 5	211..240	CDD:320207	10/33 (30%)
		TM helix 6	269..299	CDD:320207	8/29 (28%)
		TM helix 7	308..333	CDD:320207	12/24 (50%)
opn1lw1	NP_001300644.1	7tmA_LWS_opsin	39..330	CDD:320209	95/303 (31%)
		TM helix 1	52..78	CDD:320209	7/25 (28%)
		TM helix 2	85..112	CDD:320209	9/26 (35%)
		TM helix 3	123..153	CDD:320209	11/30 (37%)
		TM helix 4	164..186	CDD:320209	6/21 (29%)
		TM helix 5	213..243	CDD:320209	8/29 (28%)
		TM helix 6	258..288	CDD:320209	9/30 (30%)
		TM helix 7	298..323	CDD:320209	12/24 (50%)