DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaE and OPN3

DIOPT Version :10

Sequence 1:NP_524407.1 Gene:ninaE / 42367 FlyBaseID:FBgn0002940 Length:373 Species:Drosophila melanogaster
Sequence 2:NP_055137.2 Gene:OPN3 / 23596 HGNCID:14007 Length:402 Species:Homo sapiens


Alignment Length:322 Identity:88/322 - (27%)
Similarity:152/322 - (47%) Gaps:35/322 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 PDMAHLISPYWNQFPAMDPIWAKILTAYMIMIGMISWCGNGVVIYIFATTKSLRTPANLLVINLA 93
            |..|..:||    .|...|...:.|...:..||::....|.:|:.::...:.||||.:||::|::
Human    24 PAPAGTLSP----APLFSPGTYERLALLLGSIGLLGVGNNLLVLVLYYKFQRLRTPTHLLLVNIS 84

  Fly    94 ISDFGIMITNTPMMGINLYFETWVLGPMMCDIYAGL-GSAFGCSSIWSMCMISLDRYQVIVKGMA 157
            :||..:.:.......::.....||...:.| ::.|. ||.||..||.::.:::.:||   ::.:.
Human    85 LSDLLVSLFGVTFTFVSCLRNGWVWDTVGC-VWDGFSGSLFGIVSIATLTVLAYERY---IRVVH 145

  Fly   158 GRPMTIPLALGKIAYIWFMSSIWCLAPAFGWSRYVPEGNLTSCGIDYLERDWNPRSYLIFYSIFV 222
            .|.:....|...|.|||..|..|..||..||:||:.:.:...|.:|:..:|.|..|:::|..:..
Human   146 ARVINFSWAWRAITYIWLYSLAWAGAPLLGWNRYILDVHGLGCTVDWKSKDANDSSFVLFLFLGC 210

  Fly   223 YYIPLFLICYSYWFIIAAVSAHEKAMREQAKKMNVKSLRSSEDAEK-------SAEGKLAKVALV 280
            ..:||.:|.:.|..|:                .:::.||..||.:.       ..|.||||:..:
Human   211 LVVPLGVIAHCYGHIL----------------YSIRMLRCVEDLQTIQVIKILKYEKKLAKMCFL 259

  Fly   281 TITLWFMAWTPYLVINCMGLFKFEG--LTPLNTIWGACFAKSAACYNPIVYGISHPKYRLAL 340
            .|..:.:.|.||:|| |..:....|  :||..:|....||||...|||::|.....|:|.:|
Human   260 MIFTFLVCWMPYIVI-CFLVVNGHGHLVTPTISIVSYLFAKSNTVYNPVIYVFMIRKFRRSL 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaENP_524407.1 7tmA_photoreceptors_insect 52..340 CDD:320207 81/297 (27%)
TM helix 1 52..78 CDD:320207 5/25 (20%)
TM helix 2 85..111 CDD:320207 5/25 (20%)
TM helix 3 123..153 CDD:320207 10/30 (33%)
TM helix 4 164..184 CDD:320207 7/19 (37%)
TM helix 5 211..240 CDD:320207 7/28 (25%)
TM helix 6 269..299 CDD:320207 12/29 (41%)
TM helix 7 308..333 CDD:320207 10/24 (42%)
OPN3NP_055137.2 7tmA_Encephalopsin 58..316 CDD:320206 76/278 (27%)
TM helix 2 76..103 CDD:320206 5/26 (19%)
TM helix 3 114..144 CDD:320206 10/33 (30%)
TM helix 4 152..174 CDD:320206 9/21 (43%)
TM helix 5 199..229 CDD:320206 7/45 (16%)
TM helix 6 248..278 CDD:320206 12/30 (40%)
TM helix 7 288..313 CDD:320206 10/24 (42%)

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