DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaE and opn8c

DIOPT Version :9

Sequence 1:NP_524407.1 Gene:ninaE / 42367 FlyBaseID:FBgn0002940 Length:373 Species:Drosophila melanogaster
Sequence 2:NP_001304693.1 Gene:opn8c / 103909302 ZFINID:ZDB-GENE-040724-51 Length:398 Species:Danio rerio


Alignment Length:343 Identity:95/343 - (27%)
Similarity:154/343 - (44%) Gaps:55/343 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LSNG------SVVDKVTPDMAHLISPYWNQFPAMDPIWAKILTAYMIM-IGMISWCGNGVVIYIF 75
            |.||      |..|..|..:|          ||:|     |....:|| |.::|..|||||:.|.
Zfish     6 LRNGELRAGNSSADSFTSKLA----------PALD-----IAVGLIIMSIVILSVLGNGVVLVIS 55

  Fly    76 ATTKSLRTPANLLVINLAISDFGIMITNTPMMGINLYFETWVLGPMMCDIYAGLGS-AFGCSSIW 139
            ...:.....:.||.:|||:.||...|...|:..::.:...| ||..:..:|.|||. .||...::
Zfish    56 YRRRKKIAGSELLCVNLAVVDFLCCICFYPLSILSSFSHVW-LGRHITCVYYGLGCYIFGLCGMF 119

  Fly   140 SMCMISLDR-----YQVIVKGMAGRPMTIPLALGKIAYIWFMSSIWCLAPAFGWSRYVPEGNLTS 199
            ::..||:.|     |.:.::|:..|.:.:.        .|.::::|...|.|||..||||....|
Zfish   120 TIAAISVIRYIKTCYAIWLEGVNIRLVCVA--------TWLIAAVWSSFPLFGWGEYVPEPYGIS 176

  Fly   200 CGIDYLERDWNPRS--YLI-FYSIFVYYIPLFLICYSYWFIIAAVSAHEKAMREQAKKMNVKSLR 261
            |.|.:.....:.:.  |:| .::.|| .:|:.||..|...|:..:....:.:..:....|   ||
Zfish   177 CTIAWRRYHTSTKDAIYVICSFACFV-LLPVLLIMVSQCKILLKIYRFSRTLSARGIHCN---LR 237

  Fly   262 SSEDAEKSAEGKLAKVALVTITLWF-MAWTPYLVINCMGLFKFEG--LTPLNTIWGACFAKSAAC 323
            .:|        |...|....|:|.| :||.||.|::.:.:|..:.  :.|...|:.|.||||:..
Zfish   238 HAE--------KHLSVMFFCISLGFILAWAPYAVVSFLFIFHKDAQYMAPEGFIFPALFAKSSHV 294

  Fly   324 YNPIVYGISHPKYRLALK 341
            |||.:|...:..:|..|:
Zfish   295 YNPFIYFYFNKAFRQELR 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaENP_524407.1 7tmA_photoreceptors_insect 52..340 CDD:320207 84/300 (28%)
TM helix 1 53..77 CDD:320207 10/24 (42%)
TM helix 2 86..108 CDD:320207 9/21 (43%)
TM helix 3 124..146 CDD:320207 7/22 (32%)
TM helix 4 168..184 CDD:320207 2/15 (13%)
TM helix 5 212..235 CDD:320207 8/25 (32%)
TM helix 6 275..297 CDD:320207 9/22 (41%)
TM helix 7 308..333 CDD:320207 11/24 (46%)
opn8cNP_001304693.1 7tm_4 40..>229 CDD:304433 54/198 (27%)
7tm_1 47..300 CDD:278431 77/273 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48050
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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