DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaE and opn4b

DIOPT Version :9

Sequence 1:NP_524407.1 Gene:ninaE / 42367 FlyBaseID:FBgn0002940 Length:373 Species:Drosophila melanogaster
Sequence 2:NP_001245153.1 Gene:opn4b / 100884131 ZFINID:ZDB-GENE-080415-3 Length:565 Species:Danio rerio


Alignment Length:382 Identity:130/382 - (34%)
Similarity:196/382 - (51%) Gaps:66/382 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 FPAMD-PIWAKILTAYMIM-IGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITNT 104
            ||.:| |..|......:|: :|:....||.:|:|.|..::|||||||:.:||||::||.:.:|.|
Zfish    58 FPTVDVPDHAHYTIGSVILAVGITGMVGNLLVMYAFCKSRSLRTPANMFIINLAVTDFLMCVTQT 122

  Fly   105 PMMGINLYFETWVLGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAG-RPMTIPLALG 168
            |:.......:.|:.|...|::||..|:.||..|:.::.:|::|||.||.:.:|. ..|:...||.
Zfish   123 PIFFTTSLHKRWIFGEKGCELYAFCGALFGICSMITLMIIAVDRYFVITRPLASIGVMSRKRALL 187

  Fly   169 KIAYIWFMSSIWCLAPAFGWSRYVPEGNLTSCGIDYLERDWNPRSYLIFYSIFVYYIPLFLICYS 233
            .::..|..|..|.|.|.||||.|||||.||||..||:....:.|:|.:....||::||||:|.|.
Zfish   188 ILSAAWAYSMGWSLPPFFGWSAYVPEGLLTSCSWDYMTFSPSVRAYTMLLFTFVFFIPLFVIIYC 252

  Fly   234 YWFIIAAVSAHEKAM---------REQAKKMNVKSLRSSEDAEKSAEGKLAKVALVTITLWFMAW 289
            |:||..|:....:|:         |:..||::          ....|.|:||:||:.|.|:.::|
Zfish   253 YFFIFKAIRETNRAVGKINGEGGPRDSIKKIH----------RMKNEWKMAKIALIVILLYVISW 307

  Fly   290 TPYLVINCMGLFKFEG----LTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCPC---- 346
            :||   :|:.|..|.|    |||......|..||::|.:|||:|.|:|||||.|:.:..||    
Zfish   308 SPY---SCVALTAFAGYADMLTPYMNSVPAVIAKASAIHNPIIYAITHPKYRSAIAKYIPCLGVL 369

  Fly   347 -CV--------------------------------FGKVDDGKSSDAQSQATASEAE 370
             ||                                .||......||::|..|.:||:
Zfish   370 LCVPRRDRFSSSSFISTRRSTLTSQSSETSSNLHRAGKARLSSVSDSESGWTDTEAD 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaENP_524407.1 7tmA_photoreceptors_insect 52..340 CDD:320207 112/302 (37%)
TM helix 1 53..77 CDD:320207 7/24 (29%)
TM helix 2 86..108 CDD:320207 10/21 (48%)
TM helix 3 124..146 CDD:320207 7/21 (33%)
TM helix 4 168..184 CDD:320207 4/15 (27%)
TM helix 5 212..235 CDD:320207 10/22 (45%)
TM helix 6 275..297 CDD:320207 9/21 (43%)
TM helix 7 308..333 CDD:320207 10/24 (42%)
opn4bNP_001245153.1 7tm_4 78..>305 CDD:304433 87/236 (37%)
7tm_1 85..348 CDD:278431 103/275 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590442
Domainoid 1 1.000 192 1.000 Domainoid score I3159
eggNOG 1 0.900 - - E33208_3BCHK
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 212 1.000 Inparanoid score I3623
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D389088at33208
OrthoFinder 1 1.000 - - FOG0001799
OrthoInspector 1 1.000 - - mtm6356
orthoMCL 1 0.900 - - OOG6_104608
Panther 1 1.100 - - O PTHR24240
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4703
SonicParanoid 1 1.000 - - X120
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1413.830

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