Protein Alignment ninaE and opn4b

DIOPT Version :10

• Sequence 1: NP_524407.1
• Gene: ninaE / 42367
• FlyBaseID: FBgn0002940
• Length: 373
• Species: Drosophila melanogaster
• Sequence 2: NP_001245153.1
• Gene: opn4b / 100884131
• ZFINID: ZDB-GENE-080415-3
• Length: 565
• Species: Danio rerio
• Alignment Length: 382
• Identity: 130/382 - (34%)
• Similarity: 196/382 - (51%)
• Gaps: 66/382 - (17%)

  Fly    42 FPAMD-PIWAKILTAYMIM-IGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITNT 104
            ||.:| |..|......:|: :|:....||.:|:|.|..::|||||||:.:||||::||.:.:|.|
Zfish    58 FPTVDVPDHAHYTIGSVILAVGITGMVGNLLVMYAFCKSRSLRTPANMFIINLAVTDFLMCVTQT 122

  Fly   105 PMMGINLYFETWVLGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAG-RPMTIPLALG 168
            |:.......:.|:.|...|::||..|:.||..|:.::.:|::|||.||.:.:|. ..|:...||.
Zfish   123 PIFFTTSLHKRWIFGEKGCELYAFCGALFGICSMITLMIIAVDRYFVITRPLASIGVMSRKRALL 187

  Fly   169 KIAYIWFMSSIWCLAPAFGWSRYVPEGNLTSCGIDYLERDWNPRSYLIFYSIFVYYIPLFLICYS 233
            .::..|..|..|.|.|.||||.|||||.||||..||:....:.|:|.:....||::||||:|.|.
Zfish   188 ILSAAWAYSMGWSLPPFFGWSAYVPEGLLTSCSWDYMTFSPSVRAYTMLLFTFVFFIPLFVIIYC 252

  Fly   234 YWFIIAAVSAHEKAM---------REQAKKMNVKSLRSSEDAEKSAEGKLAKVALVTITLWFMAW 289
            |:||..|:....:|:         |:..||::          ....|.|:||:||:.|.|:.::|
Zfish   253 YFFIFKAIRETNRAVGKINGEGGPRDSIKKIH----------RMKNEWKMAKIALIVILLYVISW 307

  Fly   290 TPYLVINCMGLFKFEG----LTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCPC---- 346
            :||   :|:.|..|.|    |||......|..||::|.:|||:|.|:|||||.|:.:..||
Zfish   308 SPY---SCVALTAFAGYADMLTPYMNSVPAVIAKASAIHNPIIYAITHPKYRSAIAKYIPCLGVL 369

  Fly   347 -CV--------------------------------FGKVDDGKSSDAQSQATASEAE 370
             ||                                .||......||::|..|.:||:
Zfish   370 LCVPRRDRFSSSSFISTRRSTLTSQSSETSSNLHRAGKARLSSVSDSESGWTDTEAD 426

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ninaE	NP_524407.1	7tmA_photoreceptors_insect	52..340	CDD:320207	112/302 (37%)
		TM helix 1	52..78	CDD:320207	7/26 (27%)
		TM helix 2	85..111	CDD:320207	11/25 (44%)
		TM helix 3	123..153	CDD:320207	12/29 (41%)
		TM helix 4	164..184	CDD:320207	6/19 (32%)
		TM helix 5	211..240	CDD:320207	13/28 (46%)
		TM helix 6	269..299	CDD:320207	12/29 (41%)
		TM helix 7	308..333	CDD:320207	10/24 (42%)
opn4b	NP_001245153.1	7tmA_Melanopsin	69..359	CDD:320458	112/302 (37%)
		TM helix 1	70..96	CDD:320458	7/25 (28%)
		TM helix 2	103..129	CDD:320458	11/25 (44%)
		TM helix 3	141..171	CDD:320458	12/29 (41%)
		TM helix 4	183..205	CDD:320458	7/21 (33%)
		TM helix 5	230..260	CDD:320458	13/29 (45%)
		TM helix 6	287..317	CDD:320458	13/32 (41%)
		TM helix 7	327..352	CDD:320458	10/24 (42%)