Protein Alignment ninaE and prlhr

DIOPT Version :10

• Sequence 1: NP_524407.1
• Gene: ninaE / 42367
• FlyBaseID: FBgn0002940
• Length: 373
• Species: Drosophila melanogaster
• Sequence 2: XP_002940396.1
• Gene: prlhr / 100497660
• XenbaseID: XB-GENE-994391
• Length: 343
• Species: Xenopus tropicalis
• Alignment Length: 347
• Identity: 83/347 - (23%)
• Similarity: 145/347 - (41%)
• Gaps: 53/347 - (15%)

  Fly    20 NGSVVDKVTPDMAHLISPYWNQFPAMDPIWAKILTAYMIMI--GMISWCGNGVVIYIFATTKSLR 82
            |.|....:.|.||...|..:.....:....|.|:..|.:::  |:.   ||.::||:...||.:.
 Frog     5 NISTTQSLFPAMASNSSQQFMGLQLIHSYKALIIPCYSLVVFTGIF---GNYLLIYVICRTKKMH 66

  Fly    83 TPANLLVINLAISDFGIMITNTPMMGINLYFET--WVLGPMMC---------DIYAGLGSAFGCS 136
            ...|.||.|||.||..:..|..|:. :...||.  ||.|..:|         .:|.
 Frog    67 NVTNFLVGNLAFSDMLMCATCVPLT-LAYVFEPRGWVFGHFLCYFVFLMQPVTVYV--------- 121

  Fly   137 SIWSMCMISLDRYQVIVKGMAGRPMTIPLALGKIAYIWFMSSIWCL--APAFGWSRYV--PEGNL 197
            |::::.:|::|||...|..:. |.:|||.....:|.||.:|   ||  |||...:.:|  |:.:.
 Frog   122 SVFTLTVIAVDRYHATVYPLR-RRLTIPTCAYILAGIWLLS---CLMAAPALAHTYHVEFPQLDF 182

  Fly   198 TSCGIDYLERDWNPRSYLIFYSIFVYYIPLFLICYSYWFIIAAVSAHEKAMREQAKKMNVKSLRS 262
            :.|...:...:....:|.....|..|.:|..:|..||..|       ...::.:....|:.::::
 Frog   183 SICEEFWFGMEKKRLAYAYSTLILTYALPFIIIALSYLRI-------SVKLKNRVVPGNITNVQA 240

  Fly   263 SEDAEKSAEGKLAKVALVTITLWFMAWTPYLVINCMGLF-------KFEGLTPLNTIWGACFAKS 320
            ..|  ::...|..::.::.:..:.|.|.|..:.|.|...       ::..|..|...|   .|..
 Frog   241 EWD--RARRKKTFRLLVLVVGAFGMCWLPLHIFNIMKDIDIHLIDKQYFNLVQLLCHW---LAMM 300

  Fly   321 AACYNPIVYGISHPKYRLALKE 342
            :||.|.::|...|..:|..||:
 Frog   301 SACTNSLLYAWLHDSFRGELKK 322

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ninaE	NP_524407.1	7tmA_photoreceptors_insect	52..340	CDD:320207	74/311 (24%)
		TM helix 1	52..78	CDD:320207	7/27 (26%)
		TM helix 2	85..111	CDD:320207	10/25 (40%)
		TM helix 3	123..153	CDD:320207	7/38 (18%)
		TM helix 4	164..184	CDD:320207	7/21 (33%)
		TM helix 5	211..240	CDD:320207	8/28 (29%)
		TM helix 6	269..299	CDD:320207	5/29 (17%)
		TM helix 7	308..333	CDD:320207	7/24 (29%)
prlhr	XP_002940396.1	7tmA_PrRP_R	35..320	CDD:320516	75/313 (24%)
		TM helix 1	36..62	CDD:320516	7/28 (25%)
		TM helix 2	69..94	CDD:320516	10/25 (40%)
		TM helix 3	108..138	CDD:320516	7/38 (18%)
		TM helix 4	149..170	CDD:320516	9/23 (39%)
		TM helix 5	196..225	CDD:320516	8/35 (23%)
		TM helix 6	245..275	CDD:320516	5/29 (17%)
		TM helix 7	288..313	CDD:320516	8/27 (30%)