DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaE and opn5

DIOPT Version :9

Sequence 1:NP_524407.1 Gene:ninaE / 42367 FlyBaseID:FBgn0002940 Length:373 Species:Drosophila melanogaster
Sequence 2:XP_002936036.1 Gene:opn5 / 100497642 XenbaseID:XB-GENE-1018909 Length:343 Species:Xenopus tropicalis


Alignment Length:314 Identity:95/314 - (30%)
Similarity:146/314 - (46%) Gaps:31/314 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 DPIWAKI-------LTAYMIMIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITN 103
            ||..:|:       ...|::.||::|..|||.|||:..:.|....||.::.||||:.|.||.:|.
 Frog    22 DPFASKLSREADIFAGVYLMAIGILSTLGNGYVIYMACSRKKKLRPAEIMTINLAVCDLGISVTG 86

  Fly   104 TPMMGINLYFETWVLGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAGRPMTIPLALG 168
            .|...::.:...||.|...|..|...|..|||.|:.::.::|||||..|.....|..:....|..
 Frog    87 KPFAIVSCFSHRWVFGWNACRWYGWAGFFFGCGSLITLTVVSLDRYLKICHLRYGTWLKRRHAFI 151

  Fly   169 KIAYIWFMSSIWCLAPAFGWSRYVPEGNLTSCGIDYLERDWNPRS------YLIFYSIFVYYIPL 227
            .:|.||..:::|...|..|...|.||...|:|.:|:    |..::      :::....|....|.
 Frog   152 ALAVIWAYATLWATLPLVGVGNYAPEPFGTTCTLDW----WLAQASVKGQIFVLSMLFFCLLFPT 212

  Fly   228 FLICYSYWFIIAAV--SAHEKAMREQAKKMNVKSLRSSEDAEKSAEGKLAKVALVTITLWFMAWT 290
            .:|.:||..|||.|  ||.|.|..:...:.|           .:.|.||.|||::....:.:||.
 Frog   213 MVIVFSYAKIIAKVKSSAKEVAHFDTRNQNN-----------HTLEIKLTKVAMLICAGFLIAWF 266

  Fly   291 PYLVINCMGLFKFEGLTPLN-TIWGACFAKSAACYNPIVYGISHPKYRLALKEK 343
            ||.|::....|......|:. ::.....||||:.||||:|.:...|.....|:|
 Frog   267 PYAVVSVWSAFGQPDSIPIELSVVPTMMAKSASMYNPIIYQVIDCKPACCKKDK 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaENP_524407.1 7tmA_photoreceptors_insect 52..340 CDD:320207 90/303 (30%)
TM helix 1 53..77 CDD:320207 10/23 (43%)
TM helix 2 86..108 CDD:320207 9/21 (43%)
TM helix 3 124..146 CDD:320207 6/21 (29%)
TM helix 4 168..184 CDD:320207 4/15 (27%)
TM helix 5 212..235 CDD:320207 4/28 (14%)
TM helix 6 275..297 CDD:320207 8/21 (38%)
TM helix 7 308..333 CDD:320207 10/25 (40%)
opn5XP_002936036.1 7tm_1 50..306 CDD:278431 84/270 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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