Protein Alignment ninaE and parapinopsina

DIOPT Version :10

• Sequence 1: NP_524407.1
• Gene: ninaE / 42367
• FlyBaseID: FBgn0002940
• Length: 373
• Species: Drosophila melanogaster
• Sequence 2: NP_001304685.1
• Gene: parapinopsina / 100331083
• ZFINID: ZDB-GENE-101129-1
• Length: 341
• Species: Danio rerio
• Alignment Length: 390
• Identity: 97/390 - (24%)
• Similarity: 164/390 - (42%)
• Gaps: 76/390 - (19%)

  Fly     1 MESFAVAAAQLGPHFAPLSNGSVVDKVTPDMAHLISPYWNQFPAMDPIWAKILTAYMIMIGMISW 65
            |||....||          :||:.: |.|.|.:                    |...::||:.|.
Zfish     5 MESETSTAA----------SGSIAE-VMPRMGY--------------------TILAVIIGVFSV 38

  Fly    66 CG---NGVVIYIFATTKSLRTPANLLVINLAISDFG--------IMITNTPMMGINLYFETWVLG 119
            ||   |..||.:....|.||.|.|..::|||::|.|        .::||.  ||   ||.   ||
Zfish    39 CGVILNVTVITVTLKYKQLRQPLNFALVNLAVADLGCAVFGGLPTVVTNA--MG---YFS---LG 95

  Fly   120 PMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAGRPMTIPLALGKIAYIWFMSSIWCLAP 184
            .:.|.:.....:.||.:::.|:.:|:|:|..|:.:.:.........|:..:|..|..|.||...|
Zfish    96 RVGCVLEGFAVAFFGIAALCSVAVIALERCMVVCRPVGSISFQTRHAVFGVAVSWLWSFIWNTPP 160

  Fly   185 AFGWSRYVPEGNLTSCGIDYLERDWNPRSYLIFYSIFVYYIPLFLICYSY----WFIIAAVSAHE 245
            .|||.|:..||..|||..|:..||....|:::.|.:..:.:|..:|.|||    |
Zfish   161 LFGWGRFELEGVRTSCAPDWYSRDLANVSFIVCYFLLCFALPFSVIVYSYTRLLW---------- 215

  Fly   246 KAMREQAKKMNVKSLRSSEDAEKS-AEGKLAKVALVTITLWFMAWTPYLVIN-CMGLFKFEGLTP 308
             .:|:      |..|:..|....: ||.:::.:.:|.|..:.:.|.||.... |:.|.....:.|
Zfish   216 -TLRQ------VSRLQVCEGGSAARAEAQVSCMVVVMILAFLLTWLPYASFALCVILIPELYIDP 273

  Fly   309 LNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCPCCVFGKVDDGKSSDAQSQATASEAESKA 373
            :.........||:..:|||:|...:.::|   ....|..:.|:......::.:.:.|...:.|::
Zfish   274 VIATVPMYLTKSSTVFNPIIYIFMNRQFR---DRALPFLLCGRNPWAAEAEEEEEETTVSSVSRS 335

  Fly   374  373
            Zfish   336  335

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ninaE	NP_524407.1	7tmA_photoreceptors_insect	52..340	CDD:320207	83/304 (27%)
		TM helix 1	52..78	CDD:320207	9/28 (32%)
		TM helix 2	85..111	CDD:320207	10/33 (30%)
		TM helix 3	123..153	CDD:320207	8/29 (28%)
		TM helix 4	164..184	CDD:320207	6/19 (32%)
		TM helix 5	211..240	CDD:320207	8/32 (25%)
		TM helix 6	269..299	CDD:320207	8/31 (26%)
		TM helix 7	308..333	CDD:320207	7/24 (29%)
parapinopsina	NP_001304685.1	7tm_GPCRs	27..303	CDD:475119	83/303 (27%)
		TM helix 1	29..53	CDD:410628	8/23 (35%)
		TM helix 2	62..84	CDD:410628	6/21 (29%)
		TM helix 3	100..122	CDD:410628	4/21 (19%)
		TM helix 4	144..160	CDD:410628	5/15 (33%)
		TM helix 5	188..211	CDD:410628	6/22 (27%)
		TM helix 6	239..261	CDD:410628	5/21 (24%)
		TM helix 7	273..298	CDD:410628	7/24 (29%)