DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ninaE and taar15

DIOPT Version :10

Sequence 1:NP_524407.1 Gene:ninaE / 42367 FlyBaseID:FBgn0002940 Length:373 Species:Drosophila melanogaster
Sequence 2:NP_001076508.1 Gene:taar15 / 100034377 ZFINID:ZDB-GENE-041014-50 Length:328 Species:Danio rerio


Alignment Length:323 Identity:83/323 - (25%)
Similarity:143/323 - (44%) Gaps:36/323 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 HLISPYWNQFPAMDPIWAKI---LTAYMIMIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAI 94
            |....:||...::|...:.:   |..|:..|.:::.|||.:||......|.|.||.|||:::|||
Zfish     6 HHCFSHWNTSCSLDFHLSYVNVFLFLYISAISVLTVCGNLLVIVSITVFKQLHTPTNLLILSLAI 70

  Fly    95 SDFGIMITNTPMMGINLYFETWVLGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMA-G 158
            ||..:.|...|:..|......:.:|...|.|:..:.|..|.:|:.::.::::|||..:...:. .
Zfish    71 SDLLVGICLMPVESIRSINSCFYMGKSHCHIFHSIMSIVGSASLMNIMLVAIDRYFAVCNPLLYM 135

  Fly   159 RPMTIPLALGKIAYIWFMSSIWCLAPAFGWSRYVPEGN----------LTSCGIDYLERDWNPRS 213
            ..|||..||..:...|.:|..:.|.|       |..||          |..|.: .:...|.|..
Zfish   136 SKMTIRKALICVCLGWTVSICYNLVP-------VNLGNSDPTGAVVVCLRECAV-AVSNSWGPAD 192

  Fly   214 YLIFYSIFVYYIPLFLICYSYWFIIAAVSAHEKAMREQAKKMNVKSLRSSEDAEKSAEGKLAKVA 278
            .::     .:..|..::...|..|:.......||:....||      ..|:.:.|| |.|..|..
Zfish   193 LIV-----SFIAPCIMMLILYTRILTVALKQAKAISNMTKK------NGSQPSRKS-EVKATKTL 245

  Fly   279 LVTITLWFMAWTPYLVINCMGLFKFEGLTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALK 341
            ...|.::|:.|.|:.|| .:.:.:|..| |::.....|...:.:|.||.:|.||:|.::.::|
Zfish   246 STIIFVYFICWIPWYVI-MLNMEQFNKL-PVSISAFLCLFYTNSCINPFIYAISYPWFKRSVK 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaENP_524407.1 7tmA_photoreceptors_insect 52..340 CDD:320207 78/301 (26%)
TM helix 1 52..78 CDD:320207 8/28 (29%)
TM helix 2 85..111 CDD:320207 11/25 (44%)
TM helix 3 123..153 CDD:320207 8/29 (28%)
TM helix 4 164..184 CDD:320207 5/19 (26%)
TM helix 5 211..240 CDD:320207 4/28 (14%)
TM helix 6 269..299 CDD:320207 10/29 (34%)
TM helix 7 308..333 CDD:320207 7/24 (29%)
taar15NP_001076508.1 7tmA_TAARs 27..305 CDD:320183 78/299 (26%)
TM helix 1 28..54 CDD:320183 8/25 (32%)
TM helix 2 61..87 CDD:320183 11/25 (44%)
TM helix 3 99..129 CDD:320183 8/29 (28%)
TM helix 4 141..164 CDD:320183 7/29 (24%)
TM helix 5 185..214 CDD:320183 5/33 (15%)
TM helix 6 236..266 CDD:320183 11/31 (35%)
TM helix 7 273..298 CDD:320183 7/24 (29%)

Return to query results.
Submit another query.