DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arc42 and Acox2

DIOPT Version :10

Sequence 1:NP_650840.1 Gene:Arc42 / 42364 FlyBaseID:FBgn0038742 Length:405 Species:Drosophila melanogaster
Sequence 2:NP_444345.2 Gene:Acox2 / 93732 MGIID:1934852 Length:681 Species:Mus musculus


Alignment Length:180 Identity:40/180 - (22%)
Similarity:65/180 - (36%) Gaps:55/180 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 IFDILVTEEKSLLPGSTLYKEWRRPTERPSWQFYVYNWS---NAQAILE---HQASSASFQEIGP 88
            |.|.::||..|            ||.:..::...:|.::   |.|.||.   ..|....|:.:.|
Mouse    47 IVDRILTECIS------------RPQQLSTYALTLYKYTTTINGQTILVDFWDTAGQERFRSMHP 99

  Fly    89 FQYEE---VAEVVDV--KYHQANGTLSYRKRTFFRPSGPHSTTTNGTESERII---SVNF----- 140
            ..|.:   ...|.||  |....|.|:.|::...:||..|.....|..:::..:   |.||     
Mouse   100 SYYHKSHACVMVFDVQRKITYKNLTVWYKELREYRPEIPCLVVANKIDADMKVTQKSFNFAKKQG 164

  Fly   141 ---------------------VALLASHFGHSMDY--SVQREL-SFMLHN 166
                                 :.:..|:..:|.|:  .|.||| :|.|.|
Mouse   165 LPFYFVSAADGTNVVKVFKDAIQMALSYKRNSSDFMDEVMRELENFDLEN 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arc42NP_650840.1 SCAD_SBCAD 29..401 CDD:173847 40/180 (22%)
Acox2NP_444345.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..28
AXO 20..655 CDD:173839 40/180 (22%)
Microbody targeting signal. /evidence=ECO:0000255 679..681
Blue background indicates that the domain is not in the aligned region.

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