DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arc42 and POX1

DIOPT Version :10

Sequence 1:NP_650840.1 Gene:Arc42 / 42364 FlyBaseID:FBgn0038742 Length:405 Species:Drosophila melanogaster
Sequence 2:NP_011310.1 Gene:POX1 / 852667 SGDID:S000003173 Length:748 Species:Saccharomyces cerevisiae


Alignment Length:464 Identity:111/464 - (23%)
Similarity:172/464 - (37%) Gaps:107/464 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 RSLNARQIASLSALSETHQM--LQKSCRDF-ANNELSGNAAKFDREHLYPEKQIRQMGELGVMAV 75
            |.:.|::||.|::..| |.:  ::|..||. ...||..|.         |:|             
Yeast    76 REITAKKIARLASYME-HDIKTVRKHFRDTDLMKELQAND---------PDK------------- 117

  Fly    76 AIPEELGGTGLDYVAYAIAMEEISRGCASAGVIMSVNNSLYLGPLLSFGNDAQKKDYITPFTTGE 140
            |.|.    |..|...:...:..::......|..:.|:..|:...:...|.|.|.:.::.     |
Yeast   118 ASPL----TNKDLFIFDKRLSLVANIDPQLGTRVGVHLGLFGNCIKGNGTDEQIRYWLQ-----E 173

  Fly   141 R--------VGCFALSEPGNGSDAGAASTIAT-DK-GDHFV-----LNGTKAWITN-AFEAEAAI 189
            |        .||||::|.|:||:.....|.|. || .|.||     |..||.||.. |..|..|.
Yeast   174 RGATLMKGIYGCFAMTELGHGSNVAQLQTRAVYDKQNDTFVIDTPDLTATKWWIGGAAHSATHAA 238

  Fly   190 VFATTNKQLKHKGISAFIVP-------KATKGFSLGKKEDKLGIRGSSTCQLIFEDCVVPKENML 247
            |:|....:.|..|:..|:||       :...|.|:|....|:|..|.....:.|.:.|:|:|.||
Yeast   239 VYARLIVEGKDYGVKTFVVPLRDPSTFQLLAGVSIGDIGAKMGRDGIDNGWIQFRNVVIPREFML 303

  Fly   248 G-----------------EPGFGFKIAMQTLDAGRIGIAGQALGIGQAALELAVDYAQKRQAFG- 294
            .                 ||..........|.:||:.:...:...|.....:||.||..||.|. 
Yeast   304 SRFTKVVRSPDGSVTVKTEPQLDQISGYSALLSGRVNMVMDSFRFGSKFATIAVRYAVGRQQFAP 368

  Fly   295 -KPIAKLQSIQQ----------------------KIADMSLA----MESARLLTWRAAWL---KD 329
             |.:::.|.|..                      |:.|...:    :.:|....::||.:   |.
Yeast   369 RKGLSETQLIDYPLHQYRVLPQLCVPYLVSPVAFKLMDNYYSTLDELYNASSSAYKAALVTVSKK 433

  Fly   330 QKQPYTKEAAMAKLAASEAATLCSHQCIQILGGMGYVTDMAAERHYRDARITEIYEGTSEIQRLV 394
            .|..:...|::........|||.. :..|..||.||.......:.|.|..:...:||.:.:..|.
Yeast   434 LKNLFIDSASLKATNTWLIATLID-ELRQTCGGHGYSQYNGFGKGYDDWVVQCTWEGDNNVLSLT 497

  Fly   395 IAGSILKEY 403
            .|.||||::
Yeast   498 SAKSILKKF 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arc42NP_650840.1 SCAD_SBCAD 29..401 CDD:173847 104/445 (23%)
POX1NP_011310.1 AXO 18..702 CDD:173839 111/464 (24%)

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