DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arc42 and ACX4

DIOPT Version :10

Sequence 1:NP_650840.1 Gene:Arc42 / 42364 FlyBaseID:FBgn0038742 Length:405 Species:Drosophila melanogaster
Sequence 2:NP_190752.1 Gene:ACX4 / 824347 AraportID:AT3G51840 Length:436 Species:Arabidopsis thaliana


Alignment Length:372 Identity:113/372 - (30%)
Similarity:182/372 - (48%) Gaps:13/372 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 LSETHQMLQKSCRDFANNELSGNAAKFDREHLYPEKQIRQMGELGVMAVAIPEELGGTGLDYVAY 91
            |:...|.::|..|:....|::....::..:..:|.....::|.:||...:| :..|..||...|.
plant    55 LTPEEQAIRKKVRECMEKEVAPIMTEYWEKAEFPFHITPKLGAMGVAGGSI-KGYGCPGLSITAN 118

  Fly    92 AIAMEEISRGCASAGVIMSVNNSLYLGPLLSFGNDAQKKDYITPFTTGERVGCFALSEPGNGSDA 156
            |||..||:|..||....:.|::||.:..:...|::|||:.|:........|.|:||:||.|||||
plant   119 AIATAEIARVDASCSTFILVHSSLGMLTIALCGSEAQKEKYLPSLAQLNTVACWALTEPDNGSDA 183

  Fly   157 GAASTIATDKGDHFVLNGTKAWITNAFEAEAAIVFA---TTNKQLKHKGISAFIVPKATKGFSLG 218
            ....|.||.....:.:||.|.||.|:..|:..|:||   |||:      |:.|||.|...|....
plant   184 SGLGTTATKVEGGWKINGQKRWIGNSTFADLLIIFARNTTTNQ------INGFIVKKDAPGLKAT 242

  Fly   219 KKEDKLGIRGSSTCQLIFEDCVVPKENMLGEPGF-GFKIAMQTLDAGRIGIAGQALGIGQAALEL 282
            |..:|:|:|......::.::..||.|:.|  ||. .|:...:.|...|:.:|.|.:||.....::
plant   243 KIPNKIGLRMVQNGDILLQNVFVPDEDRL--PGVNSFQDTSKVLAVSRVMVAWQPIGISMGIYDM 305

  Fly   283 AVDYAQKRQAFGKPIAKLQSIQQKIADMSLAMESARLLTWRAAWLKDQKQPYTKEAAMAKLAASE 347
            ...|.::|:.||.|:|..|..|||:..|...:::..|:.||...|.:..|....:|::.|...|.
plant   306 CHRYLKERKQFGAPLAAFQLNQQKLVQMLGNVQAMFLMGWRLCKLYETGQMTPGQASLGKAWISS 370

  Fly   348 AATLCSHQCIQILGGMGYVTDMAAERHYRDARITEIYEGTSEIQRLV 394
            .|...:....::|||.|.:.|....:.:.|......||||.:|..||
plant   371 KARETASLGRELLGGNGILADFLVAKAFCDLEPIYTYEGTYDINTLV 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arc42NP_650840.1 SCAD_SBCAD 29..401 CDD:173847 112/370 (30%)
ACX4NP_190752.1 PLN02526 27..436 CDD:178141 113/372 (30%)

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